NKX6-1_PBX1
CAP-SELEX sample PBX1_NKX6-1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CCATATTGCCGTTGTATAATGATTAATGACTTTTTAATTA
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:1b7c89ad6e3e
|
40 | — | — | — |
|
CGACACTGATTAATTAGTCATTAATCATCCGTCAATTGGA
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:02de40865ae4
|
40 | — | — | — |
|
CTAGCATAACATAATGATTAATTGCTTTTTAATTATGGTC
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:b7d81757c3f5
|
40 | — | — | — |
|
TGGTACCAATGCAATTAATTATCGTTCAATCAATGTTAAT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:456bb30c9d35
|
40 | — | — | — |
|
GACACCTCGAATGCGATGATTGATTGTGTTTTAATTGCGT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:d45fafb3925b
|
40 | — | — | — |
|
CAGAAGCGAAATAAGTCCATTAAATTCGCATCAATCAAAC
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:876e881be02f
|
40 | — | — | — |
|
GCTTACGACATGAACATCATGTTAATGGGAAAATAATGAC
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:b5fd552c36d7
|
40 | — | — | — |
|
ATTAGATCAATCATATGGTTGATTGATTACTGTTTGTGCT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:1a980c44988b
|
40 | — | — | — |
|
ACTGGCCTGTTTGATTGATCGATTATTAATTGCTGATTTT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:9de7e6c4b11c
|
40 | — | — | — |
|
GCACGCGCCAGAAATGATTGATCGATAATTGATGATATCT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:7baf6eb7fa11
|
40 | — | — | — |
|
ACTGAATTGAAATGACAAATGAGCATTTAATTACCCCAAT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:e3691ffb7389
|
40 | — | — | — |
|
CGATAATGTGATTAAATCGTCATCAATCATCTTCGTCCTA
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:08b99b99db5d
|
40 | — | — | — |
|
TAGCAATTAAAAATCAATTTGTCACTGTTCAAGCGTAACA
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:d026b0174ca6
|
40 | — | — | — |
|
AATGCGCTGTTGATTAATGAGTGTTTAATGAGCTCAATTC
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:89ae305542e1
|
40 | — | — | — |
|
CTGTCATTACATGTTTGATTGATTATCTTTCTTGCTAATT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:afd1b936ade7
|
40 | — | — | — |
|
AAAGAGTGATTGATGTGTTTTTAATTGACGATTTTATGAC
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:4ac1520bb98c
|
40 | — | — | — |
|
GTGCGTGTGATTGATGGGTTTTTGATGACTTCTTATGAAT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:5bef2239871c
|
40 | — | — | — |
|
CACATGATTAATTACATTTTAATAATGGTGATTAGCGATA
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:136f83cf2ed0
|
40 | — | — | — |
|
TATTGATGAGTAATGATTGATCGCGTGTGTCGTAATCACA
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:0fcee7a986a0
|
40 | — | — | — |
|
AGGTTGATTGATTGATTGCATATTAATCATGCGACAGCGA
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:a2f9cd92b60f
|
40 | — | — | — |
|
ATTTTGATGGATGATCCTTAATTGCGTTTTGATGTGTTAA
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:8fe3fc495e8b
|
40 | — | — | — |
|
AAGTGCGATCCATCAATATTTGTGATTGATGACTTTTTGA
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:a0d896489a50
|
40 | — | — | — |
|
CGTTGATTAATGACGTTTTAATATGTTTACATCCTCACAA
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:0aea0e26f987
|
40 | — | — | — |
|
CGATAAGGACCATTAACTCGTTGATTGATTGGTTTTTGAT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:48fa6f83c73d
|
40 | — | — | — |
|
CGACGCAACACTCATCATACTGATTGATTAATGATGCTAT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:59f47899e4b6
|
40 | — | — | — |
|
TGGTTCACTGTCGTGCGTGTCTCATTAATTTGATTGATTA
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:07418263b741
|
40 | — | — | — |
|
GATCATCATTTGCGTTGATTGATGACTTGAAAGGTTGATT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:f7ba50853094
|
40 | — | — | — |
|
AAGATACATTGTTGATTAATTGTGTTTTAATTGCGATGAC
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:c123b940c4aa
|
40 | — | — | — |
|
ACGCGTCCCTGTGCAATTTATCATCATTGTTGATTGATTG
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:3f64920a36e4
|
40 | — | — | — |
|
TGCTGGTGTGACATGCACGTTACAAATGATGATTTAATGA
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:f779c6d134d6
|
40 | — | — | — |
|
GTGCCAGGTTACAATGATGGCTGGATGATTAATTGCTGTT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:d76fd6c75459
|
40 | — | — | — |
|
AACTACGTCTACACACCCATTAATCATCATTAATCAAAAT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:2332216b544b
|
40 | — | — | — |
|
TTGATTGATATTTAATTAACCATTGATTGATCGTCTGTCG
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:1ef0d6e63853
|
40 | — | — | — |
|
GATGATTAATGGTTTCTTAATGACCTTTTTCCCAGTTACC
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:9ec78f98e634
|
40 | — | — | — |
|
TGTTACCATGATAAATTGCAATTTAATTGCCTCCTGACGC
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:4947a7c7f782
|
40 | — | — | — |
|
TAGTGGCTATTTATGATGATTTGATGCGCGTTGATTGATT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:07b41fcb1b4f
|
40 | — | — | — |
|
CTGAAGCGTTATTAAGTAAATTGCGGATTAATGAGTTTGC
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:33ee3b933c3b
|
40 | — | — | — |
|
ATTCGTCAATACCGATGATTAATTGCTTTTCTTTTGCCGC
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:085e39818dcc
|
40 | — | — | — |
|
CGTAATCATTAACCCATCAATCAAGAACATTCCAAGCCAT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:3410ba21efd6
|
40 | — | — | — |
|
CCTATCATTTACCCATTAATCAACTGACGTAATAACCCCG
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:374e1bbfce55
|
40 | — | — | — |
|
AAGTGAGGTTACCACATCAATCAATCATAACCATCACAAC
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:31bc1e1c556a
|
40 | — | — | — |
|
CCTGACTTGCTATCAATCAATCAGTCATCACTCATCTGCT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:37165fe11f25
|
40 | — | — | — |
|
TGAGCCGTAATTATATTCGCATCAATCATTTCGTCTGCTT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:64cdf999fcfa
|
40 | — | — | — |
|
TGAGTGTGCGTGATTCGTCATTGTTAATGGGAAATTGATT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:5953461fba47
|
40 | — | — | — |
|
TAGGCCAATTAATGTGTCATGATTGATTGATGGGCTAACC
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:feb2315dc1f2
|
40 | — | — | — |
|
TCATCGAGAACATACACATCATTAATCACTCATTGTGACG
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:38ef6569f514
|
40 | — | — | — |
|
CTTAAGTTGATTAATGTCTTTATAATGAGGGTGGCTAGAT
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:c2bddf9838bd
|
40 | — | — | — |
|
ACTTCAGAGTGACATTGCTGATTAATGTCTTTTTGATTAC
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:28793eb2b0e7
|
40 | — | — | — |
|
GTGATTGATTAGCTTTTAATTAGCTGTGGAGCTTCAACGC
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:6811cf3a7585
|
40 | — | — | — |
|
TGCAATTAAAAGAACATTAGTCAAGTGGATCATTTTGTAC
PANAPTA:P78426:NKX6-1_PBX1:PRJEB66722:R3:21b958075190
|
40 | — | — | — |
SELEX rounds
R3 ·final