NKX6-1_SRF
CAP-SELEX sample SRF_NKX6-1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
ACCGGCTATCCGTCACACTGAGACACGCGTAATTACACCC
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:7b4d305b89ee
|
40 | — | — | — |
|
GTCATGATGTGGTCGTTGATAACTCTTATTTAATGCTCTT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:09257421e4f2
|
40 | — | — | — |
|
CCTATTTCCCCTCACACAACCACATTTTACCCAAATTTAC
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:9a1d69f0602a
|
40 | — | — | — |
|
GCTGCTGGCAAGGCTAAGTTATATAGCGTATATGTATATC
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:ce1534686b98
|
40 | — | — | — |
|
TACCCACTGATAACACCCAAACGCCCTGATACTTAGCACA
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:5ff0550d6fdf
|
40 | — | — | — |
|
ACAGTACGCACGCCACCGCCTACCATACTAATTAATTACC
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:d557fa507bf5
|
40 | — | — | — |
|
TTACCCAGTAACGCGCCATTGACAACTTCTACAATGTCAA
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:3da38fe8ea8e
|
40 | — | — | — |
|
CACCCGCCCCCCCCGGGACCACTTAACACTGACTCGTTCG
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:e06a272d631e
|
40 | — | — | — |
|
ATCGATAACGATTATGGCCATTAAATACCATTTATACCGA
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:a9c2a27d9d73
|
40 | — | — | — |
|
TCATTAAAAGCACATTATGTCCATAAATGGTACCCCCGAC
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:bd080c94bd6b
|
40 | — | — | — |
|
TTTAGAGTTTAAACTTGTTTACTCTTGGATCTCTTACACT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:46fa0fdf19a7
|
40 | — | — | — |
|
TGCCCCATTACAACGCCTCCGCCGATAAATAACACCGTTG
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:b43704af80e7
|
40 | — | — | — |
|
AAGTATCACCGCTAAGATCAATCGTATACACATTAACAGT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:c4f687f5f49c
|
40 | — | — | — |
|
CTCGCCCGAGGTCAGCACAATTAATTCCTAATTGTTTTCT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:2dedc5ad8f6b
|
40 | — | — | — |
|
ATGCGTAGTTTCGCTCCATCTATGGGCATCATTAAAGTCT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:7637ee7f6a83
|
40 | — | — | — |
|
CACCGCACATCAAAAAGCTATTATGCCTTATAAGGTTGCC
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:daa47407050e
|
40 | — | — | — |
|
AGCATAATAGCTGATCATATGCTCATTATCCAATCCAACT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:358a16116a21
|
40 | — | — | — |
|
TGGTGTGTACTACTTTAAGCTAACGGCATCATTAAATATA
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:da947d2b2b7d
|
40 | — | — | — |
|
AACCACATATTGCATGCGAGTCAGGGGATAATTAAATCCC
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:cfbbe8feb327
|
40 | — | — | — |
|
TAATGAAATAATGATGACCAATGACGATTCAAATACTAAT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:51e0b1db1fd0
|
40 | — | — | — |
|
TTGCATTTGGGAACGCCCGCTCAGACCGTCATTAAAAATA
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:3b024faa4d9b
|
40 | — | — | — |
|
GCTTGCGAGGATAGTGCGTAGTTAAAGTCGATTAATAATG
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:efff33dbd0f5
|
40 | — | — | — |
|
CCATCTAGGGCTTAATGTGATATTAATGACGATCAAGGCA
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:d26dbfdbed91
|
40 | — | — | — |
|
GATCTCAACCGCACACAACCATATACGGTCTAATTGCTCT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:ea033c1ed0ec
|
40 | — | — | — |
|
CCGCGGAATTAATTAAAATCCAATCATCGTTACGTCCGCC
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:afe7b41be01e
|
40 | — | — | — |
|
ATTACTCATAGACAATGATTGGTATTAACTGTTAAATTCT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:4187fd746d4d
|
40 | — | — | — |
|
TCTATTTGCAATTAGGCCTTGTATGGGCATTCGCTCAATA
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:83fc3b077a18
|
40 | — | — | — |
|
GTATTAACAATCAAATACTCGTTATGACCCTACATGGGCA
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:a1d6eb017770
|
40 | — | — | — |
|
GAGGATTACCCCTATAAGGTACGACGACATTTAATGACGT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:bf18824d72af
|
40 | — | — | — |
|
GCGATACGACCCAATTATGGAAGTAACCTCATTAAATCGA
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:70c05623fdab
|
40 | — | — | — |
|
CAGCAGGCACCACGTACTACTATACATGGCCTGATTGCGT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:1ba019681ca5
|
40 | — | — | — |
|
CCTAACGTGTCCTTGTATGGGCCGAACCTCATTATCGCCC
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:b6dcbd8573f9
|
40 | — | — | — |
|
CTCGTCCGTTCAATTATGACCATGTAGGGCAGTGTACGCT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:07b8bbafa243
|
40 | — | — | — |
|
CCCATATTACCATTTATGGCACAAAACGTATTAATTGCGT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:d98f7a6df0c5
|
40 | — | — | — |
|
TCAGCGTTATAACCCTAATCATTTATCGATAACCAAACTC
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:89a1eb61d961
|
40 | — | — | — |
|
TTGTAACACAACAAATGCAAGGTAATCTTCATTAAAGATA
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:cf681545d1ed
|
40 | — | — | — |
|
TACAGCCACACGTACATAAGCCGCGCGGTCATTAAAAACT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:77a9342f129f
|
40 | — | — | — |
|
TCAATCTGATTGCAATTACGTCATGTATGGTCATGGCGGT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:e7bec98f5c36
|
40 | — | — | — |
|
AATTGGCCACACACTCCGTATATGGTATTACAAGGGTCAT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:1a4ed138ffad
|
40 | — | — | — |
|
CCCCGCAGCACAACTGGCCAATTACCGGCAATCAAAATCG
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:36dd462f6af0
|
40 | — | — | — |
|
CATAACAGACTAGGCAGATGTCCATACAAGGCCTAATTAC
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:b9751d979c9d
|
40 | — | — | — |
|
TGGTCCTGTCGTACCAACAGTAATAGACCTATTAATTTGT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:6888635e5470
|
40 | — | — | — |
|
ACGACAAGTGGAGAACTGCGCTATATAAGGGCATAATGAT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:3de30e720fcc
|
40 | — | — | — |
|
TCGGAAACTGACCATAAATGGCCTAATTACACGTTTGCCG
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:0322833e3f81
|
40 | — | — | — |
|
CCGCGTTACTTAATTTGGTAACGCAAGGTCATTAAATAAC
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:c989194556b1
|
40 | — | — | — |
|
GCTATTAACAATCCAAATGATTACTGACGCACATGCATCT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:4ed9c633464e
|
40 | — | — | — |
|
CAATCTGAATACGCACTACCATATTAGGCATAATTACTGT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:5ee60770f408
|
40 | — | — | — |
|
AGCAATAGAAAGACAGTTCCAGAACACAGAGCCTTGACGA
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:4e0933b652fe
|
40 | — | — | — |
|
CCCCTCGTACCATATATGGAGTGTCATGCTCATTAATTGT
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:434f6110bea1
|
40 | — | — | — |
|
TTCGTGACCAATTAACCATAATAATGACGATATCGTTTCG
PANAPTA:P78426:NKX6-1_SRF:PRJEB66722:R3:b59116576509
|
40 | — | — | — |
SELEX rounds
R3 ·final