NKX6-1_XBP1
CAP-SELEX sample XBP1_NKX6-1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TCATTAAAAAACGATTAACGCGTACCTGCACAATGACATG
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:ecd98d02cea8
|
40 | — | — | — |
|
CGCCACCACCTCACCTAATTGCTATTTAATGACCCCACGC
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:5869d193dcc6
|
40 | — | — | — |
|
TCATTAACGCTAATTGTTTTTTAATAGCGTATACCGCAGA
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:0107ead96e8b
|
40 | — | — | — |
|
TGCTCCATACGTGCTAATCGCTATTTAATTGCCTGCTCTC
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:80f00743f868
|
40 | — | — | — |
|
GAATGGCACTTAATTGCATTTTAATTACATCAGCCATGAC
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:6352083f6eb4
|
40 | — | — | — |
|
CCAATTAAATGCTCATTAGTGGGAACGCGACCTGCCGAAG
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:ac59e5f32803
|
40 | — | — | — |
|
ATGCTGAGACGATGAGCCAAAGCAGTAATTAAAAAGCAAT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:c4d42b1eb7f5
|
40 | — | — | — |
|
TAATTAAAAAGCAATTAACCATCCAACTCCATGCTCACTA
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:1f3dadb0f8aa
|
40 | — | — | — |
|
GCATATTGCCTGTCTCATTAAATACCCATTAAGCCGAATC
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:9e5002de3042
|
40 | — | — | — |
|
CACGTCCTAATTACAATTTAATTACCCAATGTGCGTAAGA
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:e86fe2d5051b
|
40 | — | — | — |
|
TAAGACTGCAGGTCATTAAAAACCCATTATCGACCATATG
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:832e27fc76fe
|
40 | — | — | — |
|
ATACCTAATCAAAAAGCAATTACGGTTGTACACGTCCGTT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:59943b4a401e
|
40 | — | — | — |
|
CATCACTGCTCAATTTTGCCAATGCTAATTAAAAAGCAAT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:9f857668d7d4
|
40 | — | — | — |
|
CGGAATGCAGAAACGTGAATTAAGCTAATTGCTTTTTAAT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:32d12f36c63f
|
40 | — | — | — |
|
ATTACCCTCATTAAAAATCAATTAACGGTACTTGACCTGG
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:6daab4e35fdd
|
40 | — | — | — |
|
GTTAATCCCCAAACAATTAAAAAGCAATTAGTGGCCTATG
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:a828d6418062
|
40 | — | — | — |
|
TCATTAATAAGCAATTAAGCTAATAGAGACGATGCAACGC
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:bd3ab557843f
|
40 | — | — | — |
|
GCCGCCTGATAATGAGTCCTATCGTTAATTGCTAATTAAT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:2980e8026b3f
|
40 | — | — | — |
|
GAAACAATCAACAGCTAATGCGTAATTGATGACGATGTAA
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:a0665fa21f46
|
40 | — | — | — |
|
ATTCCCTTTAGCTCTCAGTATGACGTAATCAATAACACAT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:8aa6e737a597
|
40 | — | — | — |
|
CCGACGCGTGCCTCATTAATTACCGATTAACTCCTTGAAC
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:91ccccb352f1
|
40 | — | — | — |
|
CAGGCAATTAAATATCGATTAACCGACTACCCCCACCGGC
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:4c7c5dadc718
|
40 | — | — | — |
|
CATAATGTCATTAATAAGTCATTAATACCTACCTCGCCCC
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:d0e83b752095
|
40 | — | — | — |
|
ACGGCGTAAACCCATCAAAAAGCAATTAGCGTGTCCCGGA
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:1838f42525f3
|
40 | — | — | — |
|
GCGACAATCAAAACGGGGCAATTAATTTGCAATTAGGGAC
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:4fe7ca2f5e90
|
40 | — | — | — |
|
TATGACTTCAGATGAGGAGATAATTGCGATTTAATGGCCC
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:9ef7a1e085a3
|
40 | — | — | — |
|
CTGACACGCACTTTCCGCGTATTAAAAAGCAATTAGCGAT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:66560c7ea836
|
40 | — | — | — |
|
CGTGGGTCATTAAATATCAATTAGGGGAGACTCACTACTC
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:6821702cc684
|
40 | — | — | — |
|
ACTTGATTACCTTATAGACTGTCGCTAATGGGTAAATAAT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:aeb06d9b83ce
|
40 | — | — | — |
|
CCCAACGCAAACGCATGAACAGATCTCATTAAAAACCCAT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:a3c525beb655
|
40 | — | — | — |
|
AGACAGCCTGCCCTTTACTAATGGCTAATTAATGACGTAT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:ca8eb330ac22
|
40 | — | — | — |
|
AATGTCTTCCCCGACGTCGCTAATCGGTTTTTAATTGGTC
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:d2f9756da71d
|
40 | — | — | — |
|
ACGTGCCTGAGCTGCGTCTCAGGCCTCATTAAAAACTCAT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:da4e9581fcb2
|
40 | — | — | — |
|
AGTCAGGTAGCAATTAAATAGCAATTAGCAGGATATACCT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:feddc55df850
|
40 | — | — | — |
|
TAATCAAAAACCCATTAACGGTAAGCGATCAAAACTCAAA
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:cc8738098220
|
40 | — | — | — |
|
AAAGCCTACGCCATACACCTATTGGCAATTAAAAACCCAT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:ecef4227dd1f
|
40 | — | — | — |
|
GTGACCCTACGACTGGTAATTAAATAGTCATTATGACGCA
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:dd4867fc6f67
|
40 | — | — | — |
|
CCCTATGACCATTAACGCGCATATAATGACGTCATTAACT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:4d1f9bc6043e
|
40 | — | — | — |
|
CGAACACTAATGGCGTTTTAATGACCCTATAGCCCTCGCG
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:a8f49d10c243
|
40 | — | — | — |
|
TGACCGCCCGCTAATTGCAATTTAATAGCATCATAAACCT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:69ecd7706a08
|
40 | — | — | — |
|
GTACCATTGAACGTTAATGAACGCGTCATTAAAATGCGAT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:29f33cc2eccf
|
40 | — | — | — |
|
TCTAATTAAATAGCAATTAAGGCGACACCCCTCGTGGCCC
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:097f179d4226
|
40 | — | — | — |
|
ACCCACAAGCCTAATTAAAAACCAATTAAGCCGTAGCTAT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:38b572aec245
|
40 | — | — | — |
|
GGACGTTGAACACTAATGAGATATTAATTAGGTCTCGTTC
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:8855895d6f88
|
40 | — | — | — |
|
CACGCGCACTAATGACCTCCATTCAGTGATGACGTGCGCT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:97632da7bd63
|
40 | — | — | — |
|
TCGCCATTAATTGCTTTTTAATCGATTTCTGTACATGTAC
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:a78111693aab
|
40 | — | — | — |
|
ACACCCTAATCAAATCGTAATTAACGACACTGCAAAGCTA
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:62c305ffa36d
|
40 | — | — | — |
|
TGAGACACGTAATTAATTAAATCGCAATTAGCACCTGTAA
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:71df2a1b8456
|
40 | — | — | — |
|
ACGATACGCCGCCAAGCCCTTATGGTAATTAAAAACCGAT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:74105b5345da
|
40 | — | — | — |
|
CACAGGCGACACTGCCAACCGAGTGCCATTAAAAACCCAT
PANAPTA:P78426:NKX6-1_XBP1:PRJEB66722:R3:771037cacf8e
|
40 | — | — | — |
SELEX rounds
R3 ·final