OTP_RFX1
CAP-SELEX sample RFX1_OTP · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CGTTGCCATGACAACGTCCAGGCCCTAATTAGCACCCACC
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:d2e7d8b5f366
|
40 | — | — | — |
|
TTGCCATGACAACGTGAACTATATTCACCTAATTACGGCA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:36fbad8d47c0
|
40 | — | — | — |
|
CATACCAGCGGTTACCATGACAACCAACTGGACTTACCAC
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:02b0d3a99f42
|
40 | — | — | — |
|
TGCTATACATCCCTCGTTGCCATGGTAACCGGAGCAGACA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:7fd722e71821
|
40 | — | — | — |
|
ATGGCGCCGTTGCCATGGCAACAGTATCCTCAGTGACGCG
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:aa11b44c4ad9
|
40 | — | — | — |
|
CCTGACCGTTGCCATGGCAACCGCTATGCTGCTGCGACAT
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:d45b83402993
|
40 | — | — | — |
|
ACCCGTTGCCATGACGACGGAACCAATTATCGGCATAATG
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:3d812ffdbae9
|
40 | — | — | — |
|
ATCAACCATCGATAGTGCCGTAACCATGGCAACGGATGTG
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:b98ce3d1d87a
|
40 | — | — | — |
|
CTACAGAGTTTGTTGCCATGGCAACGAACGGCTTACCCTT
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:3c90c68b862a
|
40 | — | — | — |
|
GCACACGTGCGGCACCGCACTGCGTAACCATGACAACCAC
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:76ac08550ed4
|
40 | — | — | — |
|
TACAGTGGAAATTGGGACCGTTGCCATGACAACTGCTCGT
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:7d90e18a0cb3
|
40 | — | — | — |
|
AACTGTTAGTCGCTAAGGTCCGTTGCCATGACAACGTTCC
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:092e61be72fe
|
40 | — | — | — |
|
GACGTTGCATGGGTTTCCGTTGCCATGGCGACGGGCGTGC
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:babda2c0d5ef
|
40 | — | — | — |
|
TTTAAAGGACGCTAATGGCAACGTTGTCATGGTAACGCAA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:b2293a3bcfc6
|
40 | — | — | — |
|
TTGTCATGGCAACAAGTACACTGAAGGTGCATTTAAGCCA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:a6294f8fdd39
|
40 | — | — | — |
|
CGTGATACTATGGTTGCTATGGCAACGCAACTCACATAGG
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:1e1c5dc671da
|
40 | — | — | — |
|
GCCGTGCTAATTAACGTTGCCTAGCAACAATTACGATTGG
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:d8882ec5527a
|
40 | — | — | — |
|
TTGCTATGGCAACGACAATTACACCTTCTTATTATCAGCA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:cc989813d47d
|
40 | — | — | — |
|
GCGCATGTTCCCCGGTTGCCATGGCAACGAAGCCAAACCC
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:3988a6789dca
|
40 | — | — | — |
|
GCCCGCTATACTTGACCTGCCGTTACCATGGTAACCGCCC
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:31ed676021e9
|
40 | — | — | — |
|
TAAATCGTTGCCATGGCAACCAACATCACTAATTAGCTCA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:96e0c19c10b1
|
40 | — | — | — |
|
TTAGAACATTGATTTTACTCGTTGCCATGACAACGTGCCA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:8bdb309676b1
|
40 | — | — | — |
|
CGCCACAATCAATCGTTGCCATGGCAACCACGAATACACA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:116745cee11f
|
40 | — | — | — |
|
TACGTTGCCATGGCAACATGAACTGACTTGCAACCTTTGC
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:de5bc0e5ee3e
|
40 | — | — | — |
|
CCGTTACCATGACAACAGCAACCGTCTGGTCACTCCCTCA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:22e8a2c15265
|
40 | — | — | — |
|
CCAACTAATGACTGGTTGCCTTGGTAACCAATTACTACCA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:f3bddc4f7e73
|
40 | — | — | — |
|
CAATACTTACGTTACCATGGTAACGTATCGCGCTCTTCCC
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:8226d0c69870
|
40 | — | — | — |
|
ATGTCTATGTTGCCATGACAACCATTAATTGAGGAACGCT
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:dac80eacfff8
|
40 | — | — | — |
|
ACCTATCTACGTGTCGCGTTACCATGACAACATCTTGCTA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:3e729f3730a0
|
40 | — | — | — |
|
GTGCCCTTAAATGCCGACGCGTTACCATGGCAACAACATC
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:78c76b26a733
|
40 | — | — | — |
|
AATTGCGGTTGCCATGGTAACCACGATGTGTATGCACTTA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:8855726dd3f1
|
40 | — | — | — |
|
TTGCCATGGCAACAGTCGCGAGTTTGACGTCCAGGGTACA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:e57429568bac
|
40 | — | — | — |
|
TGCAACCTGCTTGCCTTTTGCCGTTGCTATGGCAACGCCA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:c039aa705106
|
40 | — | — | — |
|
TGGCGTTGCCATAGCAACCCTGCCTTAGATAGCTGCCCCA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:522dafbd9b0d
|
40 | — | — | — |
|
TACACTGTGCCGTTACCATGGTAACCTGTCGCAGTGCGCC
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:15b0e71c6e9e
|
40 | — | — | — |
|
AAATTCATTACGTATTAGTGAGTCGTAACCATGGCAACCA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:39a704b5afa6
|
40 | — | — | — |
|
CCCTGCTGCATCCATATGTTCGTCGTTACCATGGCAACAC
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:a0787a3fbecd
|
40 | — | — | — |
|
CAAGATCAATGTGTACCTGGCCTGTTGCCATGGCAACCCA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:3af197cea1bf
|
40 | — | — | — |
|
CAGGGCCAGCACTGTGAGGATACCGTTGCCATGGCAACCA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:f142031046a8
|
40 | — | — | — |
|
TTCTGCGTATCTGCCAACGCGTTGCCATGGCAACACTGTG
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:44145fa1a295
|
40 | — | — | — |
|
ACTACGAATTGCAATAACGTTGCCATGGCAACCGGCTGGA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:d6df0a139832
|
40 | — | — | — |
|
GAGTTTGGCGTTACCATGACAACGGTTTGCCCTTCGTCCA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:1af8535daa69
|
40 | — | — | — |
|
AATCAGCCATGTACGACCGTTGCCATGGAAACCGGGTTCA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:ae3141eae0b0
|
40 | — | — | — |
|
CGCGCGAGACCGGCACCTAGTTAGGTTACCATGGCAACAA
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:b992f8167cfc
|
40 | — | — | — |
|
TTGCTATGGCAACGGTGCTCGGGACGGATAGCCATGCGAG
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:dbbcd10bfded
|
40 | — | — | — |
|
TACGGACATCCCCCGTTGTCATGGCAACGCTGCTCGGCGT
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:963c1bbe212f
|
40 | — | — | — |
|
CCCACGTTACCATGGCAACCAATAATCTCGACCACAGCCG
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:657d07504125
|
40 | — | — | — |
|
TTGCCATGGCAACGGCATTTAACAGACTGTCTCCTTTCGT
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:8662b5abd726
|
40 | — | — | — |
|
CTGTTCGTTGCCATGGAAACGGTTGTCCCTTGAATTCTCG
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:daff761b96ab
|
40 | — | — | — |
|
CCTACTCTAGTGCGACGTTGCCATAGCAACCGGTATTGGG
PANAPTA:Q5XKR4:OTP_RFX1:PRJEB66722:R3:6641ecf5afc2
|
40 | — | — | — |
SELEX rounds
R3 ·final