PCBP1

PCBP1_GA40NGAGCTG_AAP_C_Cycle1; PCBP1_GA40NGAGCTG_AAP_C_Cycle2 · 4 runs in PRJEB47428

Organism
Nucleic acid
RNA
Rounds available
R1,R2,R3,R4
Sequences indexed
10,000

Top enriched sequences

More via API →
Sequence Length log2 FC P(active) Class Monotonicity
GGTGACTACCGCCCGTCGCAGTCTGGGACTTAGGTACGGT
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:1fa0dc3d6379
40 16.35 0.22 positive -0.33
GCTAGGGAGGGGGGTAGGGGGAACGGGCAAGGGGCAAGGA
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:2c78b46bf7fb
40 14.37 0.89 positive 0.00
GGTTAGTAAGTTGTTAGTAAGTAGTTAGTTGCGGATTGTG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:df6bc2242e13
40 13.67 0.88 positive 0.00
GAGGGGAGGAAAGGTAAGGGGCAGGGGAGGGTTAAGGAGG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:311020cc1d7a
40 13.48 0.92 positive 0.00
TAGTTTGTTAGTAATTGTTAGTAGGTTAGTGGGCATATGT
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:bd4d6cbd4b93
40 13.48 0.85 positive 0.00
GGGGGCATAAGGAAGGGAAGGTAAAAGGGAGGGGTAAGGG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:23281537ba1f
40 13.13 0.91 positive 0.00
AGTGTTAGTAATGTTAGTTGTGATGATTGTTAGTGGGGTC
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:78b228b34217
40 12.84 0.91 positive 0.00
AATGTTAGTAGTTGTTAGTTGTTTGTTACGGTGATGGCAC
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:39f40026d62e
40 12.67 0.88 strong_positive 0.33
TGTCTAATGTTAGTAATGTTAGTAGTGGGTTGTCGTTTCA
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:11f9cc1a6957
40 12.67 0.85 strong_positive 0.33
TGTGGGCAAGGGGAGGGGTAAGGGCAAAAGGGCGAGGGGC
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:f646768f19ae
40 12.48 0.89 positive 0.00
ATTGTTGTTAGTAGTGTTAGTAAGGGGGATGGGAGGACTT
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:ff0f86aef792
40 12.48 0.93 positive 0.00
TGCTAAGGGTAAGGGAGTTGGGGCTGGGGAGGGGCAAGGG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:3ae0071739b4
40 12.48 0.89 positive 0.00
TGTTAGTAGTTGTTAGTAGTTTGTTATGAATCGAAGCTCG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:5e57987475e4
40 12.48 0.87 strong_positive 0.33
AAGGTTAGTAATGTGTTAGTAAGTAGGTGAAGCACCTAAC
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:5e1dbfca286f
40 12.48 0.76 strong_positive 0.33
GCGGAGGGCAAGGGGAGGGGCTAGGTTGGAGGGGAAGGGA
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:09ced2df2b21
40 12.48 0.90 positive 0.00
GGTATTATGTTAGTAGTGTTAGTAGTGGTTCGATTTGGGT
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:e128ee3c482a
40 12.48 0.88 strong_positive 0.33
TATCGGGGCAAGGCAAGGAGGGGAGGGTAAGGGAGGAAGG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:27c8d96d2316
40 12.26 0.83 positive 0.00
GGGAGGTGGGAGAAGGGGCTGGGCGAAGGAGAGGGCAAGG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:81d3779a13e4
40 12.26 0.88 positive 0.00
GGTGAGGGGCAGGGAGGGTTAAGGGGCAAGGGGGTAAGGG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:2ac0b6cfa9b1
40 12.26 0.91 positive 0.00
GGGGGTAAGGGGGAGGGTAGAAGGTAAGGGAGGGTAGGAG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:2498a3582477
40 12.26 0.92 positive 0.00
CTGTTGTTAGTAATGTATGTTAGTATGCGTTGGAGATGGT
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:b652ddb1c291
40 12.26 0.88 positive -0.33
GGCAGGGCAGGGGCAGGGGAGGGCAATATAAGGGGCAAGG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:17fc597f4889
40 12.00 0.76 positive 0.00
ATTGTTAGTTAGTGTTAGTATATGTGTTATGGATGAATGG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:c0c120cc51e5
40 12.00 0.89 strong_positive 0.33
GGTTGTTAGTCTTGTTAGTAATATGTTAGGTGGTAGTTAG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:faf0cf54ff50
40 12.00 0.89 strong_positive 0.33
GGTTAGTAGTTGTTAGTAGATGGTTGTGGAATGTGGTCAC
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:d739494dba96
40 12.00 0.85 positive 0.00
AATGTTAGTAATGTTAGTAGTAAGTGGGTGTCGTGGGTGC
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:431056ebb44d
40 12.00 0.87 strong_positive 0.33
CTGTTAGCATGTTAGTATTGTTAGTAGCATTAGAGGATCG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:23d6dc7d46db
40 12.00 0.87 positive -0.33
GGTTAGTAGTATTAGTAAGGTTAGCTGGTAGGATCTGGCT
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:e54e175fe2bb
40 12.00 0.85 strong_positive 0.33
AATGGGCAGGGGGCTGGGTAAGGGGAGGGAAGGGGCAAGG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:84032845a041
40 12.00 0.90 strong_positive 0.33
GCCGGGGCAGGAGGGTAAGGGGCAGGTAAGGGGGCGAAGG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:5c22cf9b32ab
40 12.00 0.86 strong_positive 0.33
GGGGTGACTAGGGGGTAAGGGCGGTGGGAGAGGGGCGAAG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:2b73d7491546
40 12.00 0.83 strong_positive 0.33
GGGGCAGGAAGGGGCTGGGGCGGTAAAGGATGGGGGAAGG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:89658d072352
40 12.00 0.86 strong_positive 0.33
TGATGTTAGTAATGTTAGTGAAGGTTAAAAGGCGGGGGTT
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:06d97fe5dbd6
40 12.00 0.92 positive 0.00
GGAAGGGGGGGTAAAAAGGGAGGGAAGGGGGAGGCTTAGG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:e8a4276345e3
40 11.67 0.92 strong_positive 0.33
CTTCATATTGTTGTTAGTATTGTTAGTAGTGCGGGGTATG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:d87464347676
40 11.67 0.85 strong_positive 0.33
TGATGTTAGTAAATTGGTTAGTTAGTAGGTAGGTTAGGGT
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:9b252dd7cf9c
40 11.67 0.92 strong_positive 0.33
GCCGGGTAAGGGAGGGGCAAGGGGTAAGGGGGTTTCGGGT
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:af2dd0c8f0ac
40 11.67 0.69 positive 0.00
TGGGGGGAGGGAGGGGGGTAAGGGGCGAAAAGGTTTAGGG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:b6d11863929c
40 11.67 0.89 strong_positive 0.33
GGGGGCAGGGGTATAGGAAGTAGGGGTGGTTGGGGTTAGG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:f305c4a63f9f
40 11.67 0.82 strong_positive 0.33
AAGGGTATTGGGGAGGGTGATGGGTAGGAAGGGGAGGGGT
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:9e931f2fb765
40 11.67 0.91 positive 0.00
GGCAAGGTTGTTAGTAGCTGTTAGTAAGTGGGTACGGCCA
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:40dfdf479f05
40 11.67 0.65 strong_positive 0.33
GAGGGCTGGGTAAGGGGCTAGGGGGTAGGAAGGGGAGGAG
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:70e33254b202
40 11.67 0.91 strong_positive 0.33
TGTTAGTGTTAGTTGGTGTTAGTAATTAGTCGGGACAGGA
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:7c3d16af34d9
40 11.67 0.89 strong_positive 0.33
GGAGGTACGGGGGTATGGGCGAAGGGGTGAGGGGTGGGGT
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:4237572089fb
40 11.67 0.80 strong_positive 0.33
GGGAGGGTAAAGGGGTATGGGCTGAGGAAGGGGTGGGGGC
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:3e8aa97fe835
40 11.67 0.89 strong_positive 0.33
ATGTGTTAGTAGTATTAGTAAGTTTCTGTTAGTGCGGCAT
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:e45b274e0cfa
40 11.67 0.86 positive 0.00
GTAGAGGGGTGAGGGCAGGTAAGGGTAAGGGGCTGGGGGA
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:4f0179ceb3cb
40 11.67 0.90 positive 0.00
AGGGGTAAGGGAGGCGGGTTGGGAAGGGTAAGGGAGATTT
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:feb599e5999e
40 11.67 0.89 positive 0.00
TGTTAGTAAAGTTGGTGTTAGTTTGTCTGTTAATTGGTGT
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:671ce5610c51
40 11.67 0.90 strong_positive 0.33
CCGGTGTTAGTAGTTGTTAGTGAGGTTAAGGTTTGGGGTT
PANAPTA:Q15365:PCBP1:PRJEB47428:R4:f9e973f0cc63
40 11.67 0.90 positive 0.00

SELEX rounds

R1 R2 R3 R4 ·final

Structural & language-model features

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Pre-computed feature catalog (paths only — files served separately).

Residues
356
FASTA
ESM-2 mean
ESM-2 per-residue