PKNOX1_TBX21
CAP-SELEX sample PKNOX1_TBX21 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GCGATTTCGCACCTACATTGACAGATCTGCCAACACCTGC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:3ef95d2e506a
|
40 | — | — | — |
|
TTCACACCTGTCAGTTTGTGACAGAGCACCTTTCGCACCT
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:41f375c3d721
|
40 | — | — | — |
|
TGACAGCATCACACCTGCCATGCTGTGTCAACACCTCCGG
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:f20a929a259d
|
40 | — | — | — |
|
TCGCACCTAATTAGCGAATCTCACACATCCACAACCTCCG
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:c982be110850
|
40 | — | — | — |
|
TCTTGCTAACACCTTAATGACATAACTGTCATCACCTACG
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:0bea8744550c
|
40 | — | — | — |
|
CTCCTAGGTGTGAAACTTGTGTCACACCTCACTCACGGTG
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:236928053905
|
40 | — | — | — |
|
GATACACCAGTATAAGGTGTGATTGGCACTTCACACCTCG
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:6c80e62bcf0b
|
40 | — | — | — |
|
AGACGCCCCTAGTGTTGACATTTATGTCAATAGGTGTGAT
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:504965f6557e
|
40 | — | — | — |
|
TTCCTCACGCTGTCACAACTGTCAACACCTTCGCGCAACG
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:a6d4ef782cfb
|
40 | — | — | — |
|
CCGTGAGCACAGGTGTTATAGCACTTTCACACCTACGCAC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:7a56822613c4
|
40 | — | — | — |
|
TCACACTTGTCACCTGCTTGTCATTATTCGTTTACACCTC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:368598c1e1fa
|
40 | — | — | — |
|
TGACCAGCTTAAGGTGTGAGCTAACAGTCACACCTCGCCT
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:bb75425f4d78
|
40 | — | — | — |
|
TTCCCCATGTTCACACCTCATTAACACCTCCCGCCGTCAC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:a34da5cd2feb
|
40 | — | — | — |
|
ACTAACACCTCCCCCTGTCACTTCGCACATCATTAACGTG
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:53ed6cc577eb
|
40 | — | — | — |
|
GCCCATGAGCACGGTTCACACCTCATTAACATCTCACACC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:1519c76402ab
|
40 | — | — | — |
|
GTAGGTGTGACTTGGTGTTCACACATTTGACGGCAATTAC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:9799198ee8bf
|
40 | — | — | — |
|
AGGTGCGAAAAGCCAGCGACACCTTGCACATCCCACCATA
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:54d1cb440995
|
40 | — | — | — |
|
CTATGGAGGTGTTACTCGATGTCACACCTTTACCGACCTC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:b743ae751c7b
|
40 | — | — | — |
|
AACGAGGTGTTAACGCAACTTCACACCTTAAGATCGTACC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:fe02cf5daca6
|
40 | — | — | — |
|
AAGGTGATAACTGGTTTTCACACCTTCTTGCTCTTCGTCC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:0d19c3884002
|
40 | — | — | — |
|
GGTGTGAACTTGTTATCACACCTCGCACCTATGCGTCTTA
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:2501748f6de9
|
40 | — | — | — |
|
GAAGGTGGTAGGTTCACTAATTAGGTGTCAACTCGATCGC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:e47cbab6cf6a
|
40 | — | — | — |
|
TCACACCATAGCTAAGGTGCCAACTCCCATTAACACCTTC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:56da129ac0a2
|
40 | — | — | — |
|
CACAATGGCACCTAATTAGCCTCCTTTCACACCTGACACG
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:9a5c1f92c9e5
|
40 | — | — | — |
|
TTTCGCACCTATCCGCAGAGATAACACATCATTAGCATAC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:948bdb48e127
|
40 | — | — | — |
|
AAGGTGTGAACCATGTTAACACCTCAGCCCTCGTCAATCA
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:eae31e8c2da5
|
40 | — | — | — |
|
TTAGGTGTCATTACACTTTCACACCTCCCTGAGCGGCGCG
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:f2bb10ac9980
|
40 | — | — | — |
|
TCTCACACCCTGAGACAACGATTCGCACATCATTAGCTAC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:b09cb5a5122c
|
40 | — | — | — |
|
CAATGTGTGATTCTTATTTCACACTTTATGTCCCACTGCG
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:b1e89d7a3f7b
|
40 | — | — | — |
|
CCGTTACCGAGTAGGTGTCAAATGACTTTCACACCTTATG
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:1cae1b0521ee
|
40 | — | — | — |
|
CGGCGCGCAGATGTGTGAACGTATGTAACACCTCTCATCC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:1b644c663b1e
|
40 | — | — | — |
|
GAACTGTGAAAAACGTTTCACACCTGATCCTCGTCACGCA
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:4ed4157aa85d
|
40 | — | — | — |
|
CGTCAGCTGTCACCACCTTGTACACCACCTTCACACCTCA
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:532dbcac7270
|
40 | — | — | — |
|
TCGCACGACGAGGTGTCAACGGCCTCCAACACCTTAAGCA
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:ead243b93b72
|
40 | — | — | — |
|
TCACACCTAATTAGCAGTAGGTGTCACAGTTGCCCCTTCG
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:7500860ea0fc
|
40 | — | — | — |
|
GCATAGTAGGTGTGAATATCGATTGACACCTATCGTACGT
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:ce971ef9711b
|
40 | — | — | — |
|
TCATTAACGTGTGAACACTGTTAACACCTTCTATTCGGCA
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:97d7526ba2ae
|
40 | — | — | — |
|
TTCGCACCTAATTACACACACTGACACCTACCGTCCGCTA
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:0afc51f3bfc0
|
40 | — | — | — |
|
CAATGTGTGAAACGCTTTTCGCACATTGATGCTGCCCAGG
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:c16adcc0380d
|
40 | — | — | — |
|
ACCATGTTAGGTGTGAACCCACCTAACACCTGACGATACC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:d1aa54bebb13
|
40 | — | — | — |
|
ACAGTGTGAACCGTATTTCACACCTCGTTACATAGGTCAC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:5bcaa6fb6703
|
40 | — | — | — |
|
GAGGAGGTGTGAACCTCTGTTCACACCTCGAAATTACGCG
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:d8066b57704e
|
40 | — | — | — |
|
GAGGTGAGACCTCGCGATCACACCTTTGGATGAATGCGAC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:d8e65cf4dba4
|
40 | — | — | — |
|
ACAACAGTTCACACCTGTCACGACTGTCTCACACCCTACC
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:0e337c1d87b2
|
40 | — | — | — |
|
ACTGCATACTGTAACGTGTGATATTCTGTTGACACCTACA
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:89f0d15d11b3
|
40 | — | — | — |
|
AGAGTAGGTGTGAAGTGATTGTAGCACCTCATCCATGCTG
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:3551f7dd07b2
|
40 | — | — | — |
|
GACACATCTGTCAACACCTCCCTACCCCCCTCCCCACCTT
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:232af106d603
|
40 | — | — | — |
|
GGGACACAACCCCGCTAAGGTGCGAACACACCTCACACCT
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:ea1299264efe
|
40 | — | — | — |
|
CCACCTCCTCAAAGGTGTGAAGTGCGCCAACACCTTCGAA
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:d51e31a90f7a
|
40 | — | — | — |
|
AGCTAGGTGTGAACAACCCTTCACGCCTCGGAACTCGTCA
PANAPTA:P55347:PKNOX1_TBX21:PRJEB66722:R3:d66f36d79804
|
40 | — | — | — |
SELEX rounds
R3 ·final