RFX5_VSX2
CAP-SELEX sample RFX5_VSX2 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GCGGTTAATTCTGTTTAATAATCGTGCAGATACCATATAT
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:684b7f84bc0c
|
40 | — | — | — |
|
AGACATCAGTTTTCATTGGTGGCATTTGTCACCCAAGCCG
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:865508162c9f
|
40 | — | — | — |
|
AATTCCAACGTGCACGGTGTCTAATGAGGAGATGACCCTT
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:11b2b38b8da9
|
40 | — | — | — |
|
AATCGGCCTCGTAAGCAACTCATCCGCGGAAAGCGGCCCT
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:c3a1fed37a29
|
40 | — | — | — |
|
TCCTCAAGCAGCAAAATACTACATTTAAATCCCGTGCTAA
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:b88b46d81eeb
|
40 | — | — | — |
|
AAACGTTAATGATAGCCTCCTGTAGAGAGATTTTCGGTTG
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:bbd29d479f27
|
40 | — | — | — |
|
TCACAGGCTGCGCGGTAGCACGCACAAATATAAGACGACC
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:eeef89105714
|
40 | — | — | — |
|
CGAGCGATTAAAGTGCATATTTGACACCCCACGCCGTTTC
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:f6c96f6bdd86
|
40 | — | — | — |
|
CTAGTTGTTAAACACTTCATGGATGTAACAAATAGCCTTT
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:f16ed538a708
|
40 | — | — | — |
|
AGCCTTCGCCAATTGGGACATCCTATCTGTTGCACAAAAC
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:b565fc832f63
|
40 | — | — | — |
|
TCTGCTTAAGAATAAAGGCGGCATCATAGTAGGTACCGAC
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:83ee9adafc6b
|
40 | — | — | — |
|
CGGCTACATAATTCCCTCTTGTGCTCTTCGTGATGCGCAA
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:6a6f9b80d9d9
|
40 | — | — | — |
|
CTATTCGCGTATCCGTGTTCCCGACACAAATTTAGGATTC
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:b671f79c2ad0
|
40 | — | — | — |
|
CCTGTATGGTCAAGTCAAGTGTCGTATACAAAACGTTCGG
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:0f87691b8ca5
|
40 | — | — | — |
|
CAGGGGGAATACTGCAACGTCTAAAGATCATTTGCAAACT
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:3122a024c947
|
40 | — | — | — |
|
GTGCTGCGAGCCATGAGTCTCTGAGGTAAAAAGGGGAGCA
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:79e81790a59b
|
40 | — | — | — |
|
ACAGTGAAGCGATCCAATCGCTGGGCTCCACAGCCGCCAC
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:c2b91bb3aa59
|
40 | — | — | — |
|
GCTTTGCAGGCTCCTCTTGGCCCGACTCTAGGACTCCTTT
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:c740e85761fb
|
40 | — | — | — |
|
AGGCCGTGGTACGTTAGCCGGGAGGGGAAGTATGCTAAAA
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:387eade7e981
|
40 | — | — | — |
|
GAAAGGAGAGACCAACCCCTGGCCAGCAATACCGCGAATT
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:9088e9ed1ba3
|
40 | — | — | — |
|
AAGTAGCTATTTTAGTTAGCTAATAGCTACTTACGCGAGG
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:f7e3f7a711fa
|
40 | — | — | — |
|
GGCTGCTGATTAGCCCCTATCATAATCAGGCTAATCATAG
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:5d12c7a2909f
|
40 | — | — | — |
|
GCGCACTTAGCAGTTATCCGTCGTACTAACAGTTAATTGC
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:c19d0ebaa1f8
|
40 | — | — | — |
|
CTATGTTTACCCGCGTGGCAAACCAGAGATCTCGAGGCGG
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:9aa991f77d2b
|
40 | — | — | — |
|
GATTAGCCTGGTTGTAACGACGCTAATTACCGGGATAGGC
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:5a9038d76fd2
|
40 | — | — | — |
|
CCTCCACCACTCAAGCAAGAACGCTCCGTTCACGCACGAA
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:844e998ad91d
|
40 | — | — | — |
|
GTCTCCTGCATCGCAGCCGAGACACCCTGCATTGCAGAGC
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:309c14afe564
|
40 | — | — | — |
|
CGCTAATTGGCCCTATTACGTGACCAGGCCAATTATAGTT
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:2d691ef564f2
|
40 | — | — | — |
|
CCTAATTAGCACAATTGAGCCAATAACAGCTGGAGCGGCA
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:7e7b5dd98592
|
40 | — | — | — |
|
TGGTGCCGGAGTGAGCCGCATGGTGATGAGGGTATTGATC
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:2215c36eef9f
|
40 | — | — | — |
|
CCTAATTAGCCATAAGTAGAAGGACTGATCGCTAATTAGT
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:efd0a62f9e2f
|
40 | — | — | — |
|
ACGATTACCAAGTAGCGACATAGTAACCGACACACACGGC
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:47bd238f71be
|
40 | — | — | — |
|
CCGGTAAAATCCATCTGGGACGAAACTAGTTAATTTGACC
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:8feee438f457
|
40 | — | — | — |
|
CCCTAGCAACGAGATGCGCTATCGTTGCTAAGGACGCACT
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:b2e7e736d772
|
40 | — | — | — |
|
TTGACGCTATGATTAGCGTGAAATTAGCCCAATCATCTCA
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:ed0f1a7b76d2
|
40 | — | — | — |
|
ATAGTTCCATGCTCGTTCAAGTAAGCTAATTATGCTCGAC
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:6797ebb451c4
|
40 | — | — | — |
|
ACACATGGCAACCATCGACACAGCTCTTGATTAGCCCAAT
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:360613d3b23d
|
40 | — | — | — |
|
AAGTAAGCTAATTTAAATGCGACGTGAGGCACGAGCTAAT
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:d83d3eb5809e
|
40 | — | — | — |
|
GCCCAGACTCCATGCACACAGAAACTAGCCCTGCTACTCG
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:79d9a10f2ea2
|
40 | — | — | — |
|
AATTAGCACAATCATGCTATGTTCGCACGTCTGGCTGCGA
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:b9cb5f594c42
|
40 | — | — | — |
|
ATAACTCCTAATTAGCATCATTCAGCTAATTAGCCCGCAA
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:ca25654aa35f
|
40 | — | — | — |
|
TACACACGTCCTCACGCTATCCCTTAATTAGCTCACTTAG
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:e8ee4abc5013
|
40 | — | — | — |
|
GGCCATGGTAACAAGCTAATTACCAGGCCTAGCGCCGTGT
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:afe37dfbfb5b
|
40 | — | — | — |
|
ATAGGCAAATTGCAGTGACTGGCGCAATTAGCCAATAATC
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:2048e78a9953
|
40 | — | — | — |
|
CCCCTGCCTTGCATCATTACCCAGCAACGCGTAGCAACGA
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:b95076f69edd
|
40 | — | — | — |
|
GATAATACCCTCAAGTGAGCTAATTTGCCGCATGGCACGT
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:de2759a2e042
|
40 | — | — | — |
|
GTTACCGCAAACAAGCTAATTTGGTACTACTGCACGCATG
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:c14d331452f6
|
40 | — | — | — |
|
ACCTTAGGACTACTTGTGCCAGAGTACTCGGTAGTAGTAC
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:64b1d2f10dea
|
40 | — | — | — |
|
ACATGCCATACTCAAGCTAATCATGCTAATCACACCACCC
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:1cd926cc366c
|
40 | — | — | — |
|
GGCAACGGGTATCCATGTGTTGCTACCTCAGTGCTCGTTA
PANAPTA:P48382:RFX5_VSX2:PRJEB66722:R3:fa099e482199
|
40 | — | — | — |
SELEX rounds
R3 ·final