SOX2

HT00233TSAD_SOX2_FL_IVT_Cycle2; HT00233TSAM_SOX2_FL_IVT_Cycle1 · 20 runs in PRJEB61115

Organism
Nucleic acid
DNA
Rounds available
R1,R3
Sequences indexed
10,000

Top enriched sequences

More via API →
Sequence Length log2 FC P(active) Class Monotonicity
TTGTGGTTCCTATTGTTATTGACTTGTATTGCTAACAAGT
PANAPTA:P48431:SOX2:PRJEB61115:R3:1a30cf62c8b5
40 12.48 0.94 strong_positive 1.00
TTGTCTTTGTCAAGTCGACGCGACCCATCGCCATTGTTAC
PANAPTA:P48431:SOX2:PRJEB61115:R3:6ecf0bd6683f
40 12.48 0.94 strong_positive 1.00
TTGCGCGGTATTGTTTTCGTGACAATGGACGTATCGGTAG
PANAPTA:P48431:SOX2:PRJEB61115:R3:5d50ec100642
40 12.48 0.75 strong_positive 1.00
GCCAATTGTTTATTGTTTATAGCACAAAGGACGCTTCCTT
PANAPTA:P48431:SOX2:PRJEB61115:R3:6f0d635f7e98
40 12.16 0.67 strong_positive 1.00
CAATGCGTGCTATTGTGTAGCATGTCGCTCGTCCGTTGTC
PANAPTA:P48431:SOX2:PRJEB61115:R3:ca75f6572d82
40 12.16 0.53 strong_positive 1.00
TTGTCGTTGAGCGGGGTGACGCAAACAAAGGGCCCATTGT
PANAPTA:P48431:SOX2:PRJEB61115:R3:3c7d397f3cf7
40 12.16 0.88 strong_positive 1.00
CTTTGGACAATTTCCTTTGTTTGTCTCTGATTTAGTGTGT
PANAPTA:P48431:SOX2:PRJEB61115:R3:b11226db4117
40 12.16 0.72 strong_positive 1.00
GGAACAATGGAGGTGTATTGTGGCTGCGTTGAGAGGACAA
PANAPTA:P48431:SOX2:PRJEB61115:R3:2b7c2f21ef8b
40 12.16 0.30 strong_positive 1.00
TTGTGAGGTTAACACGGCGCATCATTGTCTAGGGTGACAA
PANAPTA:P48431:SOX2:PRJEB61115:R3:e00ead81a1dd
40 12.16 0.69 strong_positive 1.00
CGGGTACCCATTGTGTTAGGACAATAGGGCGCTTGTGGCT
PANAPTA:P48431:SOX2:PRJEB61115:R3:e9353e8a9308
40 12.16 0.32 strong_positive 1.00
TTGTATTCGGTAGGGCGAATCGTCCATTCGTCGTGTTGCT
PANAPTA:P48431:SOX2:PRJEB61115:R3:84d6bbaf7855
40 12.16 0.77 strong_positive 1.00
TTGTTCGTGAGGTCAGCTGAACAATGGCCGCATTGTATGA
PANAPTA:P48431:SOX2:PRJEB61115:R3:b2d608a576e8
40 12.16 0.90 strong_positive 1.00
TTCTTATGATCTATTGTTTGTTGACAATGTAGAGTAGGCG
PANAPTA:P48431:SOX2:PRJEB61115:R3:67537f9860be
40 12.16 0.69 strong_positive 1.00
TTGTCTTAATGAATGGGGAATCGGGGGCTGGATAACCAGT
PANAPTA:P48431:SOX2:PRJEB61115:R3:a0ac9d9ad521
40 12.16 0.72 strong_positive 1.00
ATGTGGAATCGGTGAGTGTATTGTTCGTCGGACAATGGGG
PANAPTA:P48431:SOX2:PRJEB61115:R3:3e9492ec80ce
40 12.16 0.70 strong_positive 1.00
ATCGATGTTATCATCGATTGCGTTCGTAAATTACCGCATG
PANAPTA:P48431:SOX2:PRJEB61115:R3:07f7965b8104
40 12.16 0.78 strong_positive 1.00
TTGCGCGCTGTTGGCTCCGTGGGCATTGTTTTCCGTTGTA
PANAPTA:P48431:SOX2:PRJEB61115:R3:040efef5363c
40 12.16 0.72 strong_positive 1.00
CGTGGCGGTGGGGAGGCGCTGGCGGCAGTAATGGTTTTCG
PANAPTA:P48431:SOX2:PRJEB61115:R3:1ba2da92bed9
40 12.16 0.30 strong_positive 1.00
ATGTGACGCATCGAATGGTCGTGAACTCACCGCTTCCTTG
PANAPTA:P48431:SOX2:PRJEB61115:R3:b57293f5fc22
40 12.16 0.51 strong_positive 1.00
TTGTTCGTTTGTTAGGCTACGGTTCCGGTATTGTTAGTCT
PANAPTA:P48431:SOX2:PRJEB61115:R3:f76161d5db36
40 12.16 0.93 strong_positive 1.00
TTGTGTGTGTTGGCACTAACAATGGATGGATCGTGTTCAT
PANAPTA:P48431:SOX2:PRJEB61115:R3:5f9ccecb0afb
40 12.16 0.93 strong_positive 1.00
AGCAGCGGGCCGTATTGTCCGTAACTAGTTATCCCCCTGG
PANAPTA:P48431:SOX2:PRJEB61115:R3:d4c56b8b46a5
40 12.16 0.32 strong_positive 1.00
TTGTTTCCCGATAACGTCGCGAGACAATGGGTCGACGACA
PANAPTA:P48431:SOX2:PRJEB61115:R3:ac6e5220c4f8
40 12.16 0.89 strong_positive 1.00
TTGTTTATCGAGACAATGGTGGATGGTGGACGAGGATGAT
PANAPTA:P48431:SOX2:PRJEB61115:R3:09638d2038da
40 12.16 0.81 strong_positive 1.00
TTGTGTGTAAGCGGCATTGATCACGCAACTGTTGTTGTTG
PANAPTA:P48431:SOX2:PRJEB61115:R3:8e95387cce86
40 12.16 0.92 strong_positive 1.00
CGGAATGACCTACGGGTGAATCGGCGTGGTCGCATTGTGT
PANAPTA:P48431:SOX2:PRJEB61115:R3:39e7acaa3a2b
40 12.16 0.41 strong_positive 1.00
TTGTCCGATTGAGCTCTTAGAACAATGGCTAGCCTTGCCC
PANAPTA:P48431:SOX2:PRJEB61115:R3:29414fe4934d
40 12.16 0.83 strong_positive 1.00
TTGTGTGGAATCGACGGTGAGGAACAATGAGTTTGCTGTG
PANAPTA:P48431:SOX2:PRJEB61115:R3:af8dbe7f77c4
40 12.16 0.80 strong_positive 1.00
TATTGTTTTATGTTGATGGTGTCCCCGCGTCGTCGTTTGT
PANAPTA:P48431:SOX2:PRJEB61115:R3:0000c07fbaa5
40 12.16 0.81 strong_positive 1.00
GAATGAATGCTGTCAGTCTTGTGGTCTGTGCGCGTCTGCG
PANAPTA:P48431:SOX2:PRJEB61115:R3:7acfc1fb656e
40 12.16 0.26 strong_positive 1.00
ATGTGAGGGTCACGTGGGGAGGAACTAAGTGCGGTGGGGC
PANAPTA:P48431:SOX2:PRJEB61115:R3:8931ad2c803c
40 12.16 0.28 strong_positive 1.00
AAACAATAATACTCTGTTAGGCGGGTTGGGAGGGCGCTAT
PANAPTA:P48431:SOX2:PRJEB61115:R3:1c1c652aeca6
40 11.74 0.39 strong_positive 1.00
GACAATGTTGAAGCGTACACAGTGAGGATTTGTATGGCAA
PANAPTA:P48431:SOX2:PRJEB61115:R3:bde2925b012a
40 11.74 0.39 strong_positive 1.00
GATACACGGCGTGCGGCCAATAGTTTTTAGTTGTTGCGCC
PANAPTA:P48431:SOX2:PRJEB61115:R3:b248331a34d8
40 11.74 0.53 strong_positive 1.00
ATGGACTTCTTTGTGACAGGCTCGTATAAAATGGAAATGT
PANAPTA:P48431:SOX2:PRJEB61115:R3:b87acb32feb4
40 11.74 0.48 strong_positive 1.00
TCTCAATGCCCGTATTGTGTGCTGGTTGTTTATGTGTTGC
PANAPTA:P48431:SOX2:PRJEB61115:R3:53c8cf6edc57
40 11.74 0.76 strong_positive 1.00
TTGTTTGGAACGGTAGTCGCGTCGAGCTAGACAATAGCGT
PANAPTA:P48431:SOX2:PRJEB61115:R3:c095a3b9058b
40 11.74 0.88 strong_positive 1.00
CAATGGTGCCTATTGTTCCACGGAGCGTATTGTCGGGGGA
PANAPTA:P48431:SOX2:PRJEB61115:R3:b7e2ef024c58
40 11.74 0.50 strong_positive 1.00
TTGTATCCTTTGTTATGAGGGTGTGCGGCGGGTCTTTGTT
PANAPTA:P48431:SOX2:PRJEB61115:R3:55f19ab130fa
40 11.74 0.76 strong_positive 1.00
CGAGTCCATTCTTTCCTGAACAATGTACTTTAGCGCAAAG
PANAPTA:P48431:SOX2:PRJEB61115:R3:695bcffecc2d
40 11.74 0.53 strong_positive 1.00
TTGTGTGGAGGTATACAACGCAACTTCATGTGTTTCATTG
PANAPTA:P48431:SOX2:PRJEB61115:R3:5d5164ac59b0
40 11.74 0.82 strong_positive 1.00
GTTGTGCTGTCTGTCTATTGTGCGGTTTGGCAGCATATAA
PANAPTA:P48431:SOX2:PRJEB61115:R3:a681ef9ff0fe
40 11.74 0.39 strong_positive 1.00
TGTAATTGTGATTTACGTAGGATAAAGGGGGTGCCTTTGT
PANAPTA:P48431:SOX2:PRJEB61115:R3:145c8bd22463
40 11.74 0.37 strong_positive 1.00
AAATGTTTTTAGATGTTGTTTCTTTGTTCTATTGTTGAAT
PANAPTA:P48431:SOX2:PRJEB61115:R3:1aa4e7e296d9
40 11.74 0.83 strong_positive 1.00
TTGTCTACTTCGTTTGCATTGTGCACGCTGGCCATTGTGA
PANAPTA:P48431:SOX2:PRJEB61115:R3:ff4ec80e9258
40 11.74 0.91 strong_positive 1.00
TTGTTCCCACAATGAGGGAGTGTGCTATTGTTTAATGCGT
PANAPTA:P48431:SOX2:PRJEB61115:R3:b317dfb69e0d
40 11.74 0.93 strong_positive 1.00
AGGTATGACCCGGAACGGCACTGGGCACGAATGTCATGCT
PANAPTA:P48431:SOX2:PRJEB61115:R3:84bdf965a26e
40 11.74 0.30 strong_positive 1.00
ATTCGGGTTGATTGTTTCCCAGGCCACACCACGATTGTAA
PANAPTA:P48431:SOX2:PRJEB61115:R3:c087e9bd2ba3
40 11.74 0.65 strong_positive 1.00
GTGGAACCATGAAAACAAAGAGTGAAGGGTACTGCCATTG
PANAPTA:P48431:SOX2:PRJEB61115:R3:48a9c324aad7
40 11.74 0.38 strong_positive 1.00
GGGGACCGTATTGTTCCAGTGGTGCACTCATAATGTCGCG
PANAPTA:P48431:SOX2:PRJEB61115:R3:7af6e58280c1
40 11.74 0.60 strong_positive 1.00

SELEX rounds

R1 R3 ·final

Structural & language-model features

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Pre-computed feature catalog (paths only — files served separately).

Residues
317
FASTA
ESM-2 mean
ESM-2 per-residue