SRF_TCF3
CAP-SELEX sample SRF_TCF3 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CGGCCACCTGCTGCCACTCCAAAATAACTACCCATAGCCC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:45ecb614cbd3
|
40 | — | — | — |
|
GCCCTTAGCAATAATACGCCTTGTCAGCACATTTTTATCC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:5450b5e8e794
|
40 | — | — | — |
|
ATGACATCACGGCATCTTAAAGTGCACCTGCATCCGCCAC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:b41620006089
|
40 | — | — | — |
|
GGTACGTCTCGCCCGGCCACCTGCGCGGCCGGTGCTAAGC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:1b36d4b21d5b
|
40 | — | — | — |
|
CAACAGGTGCCCCCCATCACCCGTCACCACGTGCTGACCC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:a62a79076561
|
40 | — | — | — |
|
ATCAAAGACCCGCGTCCAGAACACCTGCTCTACTCCAGTC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:b9ab7f27c517
|
40 | — | — | — |
|
GGCCATGTGACTCGCAGGTGCGCGGCACCTGTCCGCCGTG
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:93686f6104ce
|
40 | — | — | — |
|
CACGCTCACCTTGCACATCCCACAAACCGGTCTAGCTCTG
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:75ef1a2a7d65
|
40 | — | — | — |
|
GTGGTACGGCCCCACAACCCCACACCGCTCACAAATGCCG
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:7d1433feec58
|
40 | — | — | — |
|
GCCAGCCGAAATCTGGCTTTCGGCCGCCAACAGATCGCTC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:bdfe5d43c97a
|
40 | — | — | — |
|
AGTATTGCTGCCTGTAACTGAGTTCCCCCGCTTACGTCGC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:fe1c8498ec5d
|
40 | — | — | — |
|
CGCACCCTCCCGTCTTCCCCCACGCCCCCCACCACCACCC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:e83937e8d39d
|
40 | — | — | — |
|
CGATACTCTCATTGCGTACACCCTGTGCAGCTAGCAGCAC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:0704a6155a25
|
40 | — | — | — |
|
GGATTAAAACCTCCCACTTCCGCTGGCCCCCCACACCTGC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:bfaf7b7e9b5f
|
40 | — | — | — |
|
CACCTCCACTGAACTCTGACCACCTGCGGCAACATATTTA
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:ed03f070a25b
|
40 | — | — | — |
|
CGCCGTACATCCCATTCCTACAAACACCCTATCCTCATAA
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:08fadcc1afc7
|
40 | — | — | — |
|
AGCCCAGCACTAGTCTAGGTGGCCCCCTCCACTCCCAACC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:019400af3aef
|
40 | — | — | — |
|
CACACGACCTACTGCTCGCCCACCTCACCCACCCCACCCC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:66cd5884455e
|
40 | — | — | — |
|
ACCTGTGACACCTACAGCGTACCTGCTACTAGCCGGTGGA
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:d48783d79d3b
|
40 | — | — | — |
|
ACGCCCCCTGCACACGAAGCTCTAACAACCCAAACTATGG
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:957dd322236a
|
40 | — | — | — |
|
CTTCCCTTTGCGAGCAACGACCACCTGCTGCAATGACCTT
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:d26da58f48dd
|
40 | — | — | — |
|
CAACATGTGCCCCGGCTAGGTGTGCACACGTCCCACTCCC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:1b8c7c6de214
|
40 | — | — | — |
|
ATGCCTAGACAAACGTCCTCCACCGCGTACCCCACACTCT
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:4f9125d39455
|
40 | — | — | — |
|
CACCAGCCGCACCATACAACCCCGGTACCCCTTGTAGTCA
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:8d4a038f6552
|
40 | — | — | — |
|
CTCCAAATCTCACACCCACCTAATGCCACCACTCTCCTAC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:57be14194e99
|
40 | — | — | — |
|
GTAAGACACTACCACTGTCTGATATCACATAGAGTGAATG
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:a966f761b953
|
40 | — | — | — |
|
ACCTGCGCCCGCTACTGACACTAGCTGTATGTTCCACTTT
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:79271622b5d6
|
40 | — | — | — |
|
ACGATACATCTGGTCGGCTGCTACTTGATCATCTGTCCCC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:80699ce0e39e
|
40 | — | — | — |
|
GTGACGCTTACTGCCTATCTAGCCCACCTGCAAAGTACCC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:bc5901db70d7
|
40 | — | — | — |
|
TACCTCGCGCGCGGTGTTATACCTACGACTCACCCCAGCA
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:01aa7ef9fa79
|
40 | — | — | — |
|
CGACCGTGGAACCGTAATCCATGACACTTACCCCGTCGGC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:c789074bbc3a
|
40 | — | — | — |
|
CCGAGCCCACCTGCAACTGGTGGGACTCCACAATGCCCCC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:e2f2cbc4ccfa
|
40 | — | — | — |
|
ATATATCCACTCCGCAACGTACAGATTGTGCTAACGCCCC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:08f47a6b201c
|
40 | — | — | — |
|
AAGTCACCACATGCGCACCTGCTACCCTCCTCAGACATTT
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:bb2797d15d18
|
40 | — | — | — |
|
CATCCGTGTTACAGCCACTTCCACCTGTCGCCGTAGTCGC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:7a4dbe3a66e7
|
40 | — | — | — |
|
CCCCCCCTTAGAGTACGCCGACACCCCCGCCCCGCAAACG
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:70352988d1f9
|
40 | — | — | — |
|
ATCCACTCACGTTCCCTCTAAGCCACCCGTATATAGTACT
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:e82487afe1dc
|
40 | — | — | — |
|
TGAATGATACTCAGCTAGCCCATCGCCCTCTAGATACCCT
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:3f2c0dc80e1c
|
40 | — | — | — |
|
AGCAATGGTGTGCGCGAATGACACAGCGACGTCCGACACT
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:e6f575fac3db
|
40 | — | — | — |
|
CCCCGTGCCGAATTTGGATTGTAGTGCACCACTAACAACT
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:c82d2410d1bd
|
40 | — | — | — |
|
ACGTGCGAACTTAGTGAGGTTCAAAACAACTGTGTATGGC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:b0f1e8cc21c3
|
40 | — | — | — |
|
TCACCACTCCCCACGACACCTGCCTGCGCCCTGGTATGCC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:872c4f9da1a6
|
40 | — | — | — |
|
CCACTTCCCTAATTGGTCCTGTCGGTTCCTCTGCTACCTG
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:b76819acb165
|
40 | — | — | — |
|
TCCCCTTACCCATCGAGACCGTCACCGGCTCGCGTCCCCA
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:fc6e7a6b8a1a
|
40 | — | — | — |
|
AGGATCGGCTCATACTCTGGTCCTCTACCTCTTACTCGCG
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:dc064f92cf49
|
40 | — | — | — |
|
CTGTGACCAACAGGACATACATACCGGCCTGTCCTTGAAG
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:6f0c083b438a
|
40 | — | — | — |
|
TTGGCATAGACCTTAGTATTCTCCTGAACCATTGAATAGC
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:d74d6be97def
|
40 | — | — | — |
|
ACCCGCCTCCCCTCTTCCCCCCGCCTATCCCCCTCGCCGG
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:64e35558b449
|
40 | — | — | — |
|
ATAGGCCAACGTTCCGCTGATTATCTCGCCCGCCGCGAAT
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:c7746c8e67b7
|
40 | — | — | — |
|
GAAAACATGGCTCCCATGTCGCCGCGCTAAGGCAAGGGCT
PANAPTA:P11831:SRF_TCF3:PRJEB66722:R3:bc0853f932a0
|
40 | — | — | — |
SELEX rounds
R3 ·final