USF1_YBX1
CAP-SELEX sample YBX1_USF1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GTTCGTCCGCTCATCCTTGCTCCACCCTCACCCTCTCGCC
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:729c96d6096c
|
40 | — | — | — |
|
AAGGCGTGGCAACCTAAGACGTTTCGGCGGATGGTACGTG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:80d58cafb662
|
40 | — | — | — |
|
CCCCTCGTTCCATCAACTCCGCCCCACGTGATTACCACCC
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:667afde6e75b
|
40 | — | — | — |
|
GCGCTAATTGCGTGCCGAGATGAAACAGGGGAAGTAGCGC
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:39b6149fc9bd
|
40 | — | — | — |
|
GCGACGCACCATGGCGTGACATCCCTGTTGTACCACCCCA
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:8319ac456e8c
|
40 | — | — | — |
|
CGCCGCTCTACCACCTATTCTTGCGTACCATCGTCACGTG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:71328c3f8ad8
|
40 | — | — | — |
|
GTCGCAGAGATGGAACGAGGTAAGGACGTATCTGCGTAAC
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:50d553bdf636
|
40 | — | — | — |
|
GCTACCTACCATCCCGCAACCCGTCCCATCCACCGCCTCA
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:b2ec96a7f8e2
|
40 | — | — | — |
|
CGTCGCATCGATGGCTTACGAAGTGCAGGGGATGGAACAA
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:0c9c6bf97506
|
40 | — | — | — |
|
GCTAATGAAAGCGTTGAGTTGAGATAGTACAGGTCACGTG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:e1560da18000
|
40 | — | — | — |
|
TGATGTACCACCTGACACGATGAACCATCTCCCCATCTAC
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:6aa0b1cd7060
|
40 | — | — | — |
|
AAAACCCACGTGACCCGCCTACTTCCATCCTGTACGCAGC
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:c3f29e50122b
|
40 | — | — | — |
|
GGCAGAAGATATGGACCACGTGATTCATAGAGGGCTTCAG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:1fbec7fa38c3
|
40 | — | — | — |
|
TTTAGCACCATTCCATCACTGTTCTATCTTCTACATGCGT
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:258b6413839e
|
40 | — | — | — |
|
CCACGACAGCCAGGCAAGGGGTGACACGTGATGTTGCGCG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:6165433935d8
|
40 | — | — | — |
|
CGCAGTTAACCCACGTGATCCTTGCGCTGTATCACGTGGG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:d950583bc600
|
40 | — | — | — |
|
TCCACCACGTCGCGTTCCACGCAGTAAGTGCTATCACGTG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:1bf7c85dea58
|
40 | — | — | — |
|
GTTGTAAGTCCCACGTGTCCTCGTACCATCTACCGCCATT
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:f3194a278fd7
|
40 | — | — | — |
|
CGTACCATCTACCCGCCAACAATCCCCTCCCCAACCATCA
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:9e397a0415e2
|
40 | — | — | — |
|
TGCCTTGCCGTCGCGTGGGGATGGAATAGTACAACGCATA
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:381cdcf532e4
|
40 | — | — | — |
|
CGTTGCGATGGGTGGAATAGTGGGCTGTGCGAAACACGTG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:8347d08e46fa
|
40 | — | — | — |
|
ACGTTGCGTGGACGTATAGGCGACGTTAGGGATGGTACGC
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:347f01fd6658
|
40 | — | — | — |
|
GCTCCTCCGTCCCTCCCAAGCACCACGTGGTGCCCCTTGC
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:3dceb209853b
|
40 | — | — | — |
|
CGTAGTTCACGGCGGCACCACGCTCACGTGATGAATGTCG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:bad0123761e2
|
40 | — | — | — |
|
CCGGTGTCGCGTGTCACACCCACGTGCTGGTGCCATCCCA
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:af2696650154
|
40 | — | — | — |
|
AACGCGTAAATGGGGATGGTACAAACTACGACAAAACGGG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:4d0dc9d303e9
|
40 | — | — | — |
|
ATTGATGCATCCAATTTCGATACAGTGGAAGGTGGTACAA
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:d032cf0053f4
|
40 | — | — | — |
|
CATATCACGTGCCCGCCTCCACGTATCGGTGGCCCACGTG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:f5c7e296801b
|
40 | — | — | — |
|
ACTCCACCATTACCCACGTGACATCCTTCCAACCACATCA
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:7cdf49240c2c
|
40 | — | — | — |
|
TGTCCTTCCTGCTCCATCAACCTCGAAGCATTGTCATCTC
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:98c4f99252c2
|
40 | — | — | — |
|
GCACACCCACACGTTCCAGTCAGTCACGTGACCTAGCGCA
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:ef99be8c95d3
|
40 | — | — | — |
|
TCTACGTCCGTGGCATCCCATCGCATTTGTTCCGGTTGCG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:905057f2a721
|
40 | — | — | — |
|
TGCCCGTCCACAAGCGAAGGAAGATGGAGCGTAACGGGAC
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:e8679baef59f
|
40 | — | — | — |
|
TACCACCTTTACGCATCACGTGTACGCCACGCCCTCCATC
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:a7d863dd4472
|
40 | — | — | — |
|
CACAACAGACGGGCATTCCCTAACCACGTGCTCCATCCCT
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:3bbe65a6d665
|
40 | — | — | — |
|
CTTAAGCGCGGATGGGTGGTACGTAAGCGCAAAGTTCACG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:a4510bf2ce39
|
40 | — | — | — |
|
CGCACGTCAACGCAGGGATGGAACTAGGACTGCTAGACTA
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:9e534e4516da
|
40 | — | — | — |
|
TGGACCATCCGCCCCTCCTTAACCGTCGCCCCACCCGCAA
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:310c5ac245d1
|
40 | — | — | — |
|
CAGCATACTCGCTCGCAACATCCCTCTACCCTATACCGTG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:175d49bb6c5b
|
40 | — | — | — |
|
AATGTAAGGCGAGCCTACGTACCATCCTTCTACCAAGCTA
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:be66c916ce0a
|
40 | — | — | — |
|
TTGACGGTCTCGGCCTGTCCCATCTTCTGATCGCGTCATC
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:4d1373a6498f
|
40 | — | — | — |
|
CCGTCGTAATGACCGCCGCTGACGTCTCGAGGTGGTACAG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:1f4422df0267
|
40 | — | — | — |
|
TAGCGGACATCGGCAAAGTACGACGTAACAAGATGGTACT
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:31351ed9add6
|
40 | — | — | — |
|
CAGGGCGCAGTCACGTGGCAAATACTCCACCTCCCCGCAC
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:5ce42d4bbc5c
|
40 | — | — | — |
|
AGACGTTTGGCCAGGTGGGTGCCGAGAGGGATGGAACGCA
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:d5e413d17485
|
40 | — | — | — |
|
GCGCATCCCCCATCCCCTCCCCGCCATCCACAGTCACGTG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:1ca7dee02f86
|
40 | — | — | — |
|
GCACGTCGTAATAGCTCATACTAATGTGATGGAACAAAGA
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:e8378e4470fe
|
40 | — | — | — |
|
GAAACGTCACGTGATCCACCCACCGTTCCACCCTTCCTGG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:159a21b6bb5c
|
40 | — | — | — |
|
GTACCATCTCGCTTGGGGGGTCACGTGACGACCACCTGCC
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:a24cbdc71ade
|
40 | — | — | — |
|
TCGATGGATGGGACAGGAGGTATTGCGCGTAAACACAGGG
PANAPTA:P22415:USF1_YBX1:PRJEB66722:R3:3b627e47ae64
|
40 | — | — | — |
SELEX rounds
R3 ·final