VDR

HT00194TSAD_VDR_FL_IVT_Cycle2; HT00194TSAM_VDR_FL_IVT_Cycle1 · 16 runs in PRJEB61115

Organism
Nucleic acid
DNA
Rounds available
R1,R4
Sequences indexed
10,000

Top enriched sequences

More via API →
Sequence Length log2 FC P(active) Class Monotonicity
GGAGGGCGGTGGGCGAGTTCAACGGGGTCACTGGGTTCAT
PANAPTA:P11473:VDR:PRJEB61115:R4:a4dc194bb558
40 17.00 0.50 strong_positive 1.00
GCTTGCACTCGGCGGGTTCACTAGGTTCATTGGGTGCATA
PANAPTA:P11473:VDR:PRJEB61115:R4:80559965d357
40 16.94 0.50 strong_positive 1.00
CTGAACTCGATGAACTCGGTACCATTCGGGTTCACGGTGA
PANAPTA:P11473:VDR:PRJEB61115:R4:7693d45a9281
40 16.52 0.50 strong_positive 1.00
GCGGAGTTCATTGGGTTCACGGAGTTCACGGCGTGGCCGA
PANAPTA:P11473:VDR:PRJEB61115:R4:e75ec0731c8a
40 16.52 0.50 strong_positive 1.00
AGATGGGTTCACTGAGTTCAGCGGGTTCGCGTGGTTCGTC
PANAPTA:P11473:VDR:PRJEB61115:R4:6b92d8ce3d49
40 16.35 0.50 strong_positive 1.00
GGTTCACGAGTTCACCGAGTTTGTTGGGTTCATACGGGTT
PANAPTA:P11473:VDR:PRJEB61115:R4:20c6f08ec914
40 16.10 0.50 strong_positive 1.00
TGTACCTATTGACCTTGTCGTGGGTTCATTAGGTTCATGA
PANAPTA:P11473:VDR:PRJEB61115:R4:faf60ba40065
40 16.01 0.50 strong_positive 1.00
TTTGGACAGGGTCATTGAGTTCACGTGAACCTGGGTTCAT
PANAPTA:P11473:VDR:PRJEB61115:R4:26801c49bdad
40 15.88 0.50 strong_positive 1.00
ACGGTCTCGAGGTCAACAAGGTCATTGGGTTCATTGCGAC
PANAPTA:P11473:VDR:PRJEB61115:R4:48760501e2ec
40 15.87 0.50 strong_positive 1.00
GAGGTCATCAGGTTCATTGAGTTCACGTCGATGTAGCCGT
PANAPTA:P11473:VDR:PRJEB61115:R4:07b18f739771
40 15.80 0.50 strong_positive 1.00
GAACTTAATGCACCGGCGAGTTCATCGGGGGCGCGCGGAA
PANAPTA:P11473:VDR:PRJEB61115:R4:9c547ac55d11
40 15.74 0.50 strong_positive 1.00
TTGACTTTGAACTCGCGAGTTCGTTGAGTTCACGTCGCTG
PANAPTA:P11473:VDR:PRJEB61115:R4:88673a2e4066
40 15.66 0.50 strong_positive 1.00
AACGTTGCTCTGAGTTCATCGAGGTCATCCGGTTCATGCA
PANAPTA:P11473:VDR:PRJEB61115:R4:fadcb3a6ed19
40 15.54 0.50 strong_positive 1.00
GGGTTCATCGAGTGCATTGAGTTCATAGGTGTAGCCCGTA
PANAPTA:P11473:VDR:PRJEB61115:R4:3552537fd629
40 15.43 0.50 strong_positive 1.00
TATGAACTCGTTAGGGTTCGTTGGGTTCAGCGGGGTCGAT
PANAPTA:P11473:VDR:PRJEB61115:R4:976bbe2595ad
40 15.39 0.50 strong_positive 1.00
GAACCGCTGTGGGTTCATTGGGTTCACAGAGTTCGGGGAC
PANAPTA:P11473:VDR:PRJEB61115:R4:153a8962b18f
40 15.34 0.50 strong_positive 1.00
TTAGGGTCATTGGGTGCACTAAGGTCATCGGGTTCACCGC
PANAPTA:P11473:VDR:PRJEB61115:R4:dc490ccf5ab3
40 15.28 0.50 strong_positive 1.00
GGATGTGCACTTTATGAACTCATGAGGTCACTAAGGTCGC
PANAPTA:P11473:VDR:PRJEB61115:R4:812db34b0c7c
40 15.22 0.50 strong_positive 1.00
CGGTTGTGGCCCTGGTTTGAACTCCATGAACTCTGTGACC
PANAPTA:P11473:VDR:PRJEB61115:R4:4a5354aeb96c
40 15.18 0.50 strong_positive 1.00
CTGCAATGAACTCGATGAACTTTCGGGTTCATGGCCCCGC
PANAPTA:P11473:VDR:PRJEB61115:R4:4ee1cb8a1d27
40 15.15 0.50 strong_positive 1.00
GGGTGAAGTGATGACGAGTTCATCAAGTTCGTTGGGTTCA
PANAPTA:P11473:VDR:PRJEB61115:R4:bca01aca7b47
40 15.12 0.50 strong_positive 1.00
GAACTCAATGAACTTGAGTTCATGGGCGCCCCATAAACGA
PANAPTA:P11473:VDR:PRJEB61115:R4:d09c42599179
40 15.11 0.50 strong_positive 1.00
GTTCGGCAACGATGGGTTCATAGAGGTCATAGGGTTCATG
PANAPTA:P11473:VDR:PRJEB61115:R4:a42ab2d7c6a5
40 14.95 0.50 strong_positive 1.00
CGTGGCATGCGTTGAACCGGGTTCATTGGGTTCATTGTGA
PANAPTA:P11473:VDR:PRJEB61115:R4:a71b21cd330b
40 14.93 0.50 strong_positive 1.00
GGCCGCAGAGTGAACCTGTTGAACTCGATGAACTTACGTT
PANAPTA:P11473:VDR:PRJEB61115:R4:d0d2e68241b9
40 14.87 0.50 strong_positive 1.00
TTGTCAGGTGTGAACTCTACGCACCGCATGAACTTAATGA
PANAPTA:P11473:VDR:PRJEB61115:R4:f6ac55d3d4f4
40 14.84 0.50 strong_positive 1.00
GAACTTGGTGAACTTGAGGTCGTGGCGGACGGCGAGGTCA
PANAPTA:P11473:VDR:PRJEB61115:R4:872647727e64
40 14.82 0.50 strong_positive 1.00
GAACTCATGAGGTCATTGAGGGCATAGGGGTTAAACGCTC
PANAPTA:P11473:VDR:PRJEB61115:R4:f3074851f2a8
40 14.81 0.50 strong_positive 1.00
GAACCCGGGGTCATTGGGTTCATGTGTACTCGCAGGGCAC
PANAPTA:P11473:VDR:PRJEB61115:R4:3b258deb9e6b
40 14.77 0.50 strong_positive 1.00
GAGGTCATTCAGTTCATCGGGTTCATGGTCGTAGCTCGAA
PANAPTA:P11473:VDR:PRJEB61115:R4:e2716e75a388
40 14.77 0.50 strong_positive 1.00
ACATTGCACGTGGGGTTCATAGGGTTCATCGGGGTCACGG
PANAPTA:P11473:VDR:PRJEB61115:R4:1b776eff88b5
40 14.75 0.50 strong_positive 1.00
GAACCCGTGCGAGGTCAATGAGTTCGTCGTGGTCGTGTGC
PANAPTA:P11473:VDR:PRJEB61115:R4:8a7efd9c1097
40 14.71 0.50 strong_positive 1.00
GGTTTGAACTCATTGAACTCAATGAACCTGTGGACCGGTG
PANAPTA:P11473:VDR:PRJEB61115:R4:be013a298cee
40 14.70 0.50 strong_positive 1.00
TGCACGGATGACCTACGGTTCGTTGGGGTCAGAGAGTTCA
PANAPTA:P11473:VDR:PRJEB61115:R4:24bfaea4d999
40 14.69 0.50 strong_positive 1.00
GATATACAGTTAGGTTTCATGAACTCTGTGAACTCGATGA
PANAPTA:P11473:VDR:PRJEB61115:R4:d06c93d5d784
40 14.67 0.50 strong_positive 1.00
TTCGGGGGCGTTGGGTTCATTGGGTTCATTTACGTTCCTG
PANAPTA:P11473:VDR:PRJEB61115:R4:4ea13c486ed9
40 14.62 0.50 strong_positive 1.00
CTGTTGGATCTCTCGAGTTCGTTCGGTTCATCGGGTTCAT
PANAPTA:P11473:VDR:PRJEB61115:R4:9befbe787d90
40 14.60 0.50 strong_positive 1.00
GTGAGTTCGTCGGGTTCGTAGGGTTCATAGCCCCAGTGCA
PANAPTA:P11473:VDR:PRJEB61115:R4:f343d27295f0
40 14.58 0.50 strong_positive 1.00
CGAGTTCGTTCGGTTCGACAGGGTCATCGGGGTCAAGTCA
PANAPTA:P11473:VDR:PRJEB61115:R4:cff0fb5bc89b
40 14.50 0.50 strong_positive 1.00
TCGCATTGACCTTACTGAACTCGTTGAACCGGTGGGGTCA
PANAPTA:P11473:VDR:PRJEB61115:R4:eda898e5121f
40 14.49 0.50 strong_positive 1.00
GCTAGGGCGAAAGGCGAGGTCATGGGGTTCACTGGGTTCA
PANAPTA:P11473:VDR:PRJEB61115:R4:eac12acdbafe
40 14.45 0.50 strong_positive 1.00
GAACCCGGTAAACTCGCGTGGGGGTTCAAAGGGTTCGCGT
PANAPTA:P11473:VDR:PRJEB61115:R4:2f1826477b8b
40 14.44 0.50 strong_positive 1.00
GGTTGGAGTTCATTCGGGTTCATTGGGTTCATCGATAACG
PANAPTA:P11473:VDR:PRJEB61115:R4:3291bea515b8
40 14.42 0.50 strong_positive 1.00
GATGGGCAGCGCGTGAACTTGGGCGAGGTCATTGGGTTCA
PANAPTA:P11473:VDR:PRJEB61115:R4:8c53a480b2a8
40 14.38 0.50 strong_positive 1.00
TGAGTTCAAAAAGTTCATACAGTTCGTAGAGTTCAGATGG
PANAPTA:P11473:VDR:PRJEB61115:R4:03cb5239d9a8
40 14.34 0.50 strong_positive 1.00
TAGTTCCGTGAATGAACTCATGAGTTCATCGAGGTCGTTT
PANAPTA:P11473:VDR:PRJEB61115:R4:46ef7004f429
40 14.32 0.50 strong_positive 1.00
GCCTACATTCAATGAACCCGAGTTCATTGGGTTCAGGTAC
PANAPTA:P11473:VDR:PRJEB61115:R4:fd02f54df8ac
40 14.31 0.50 strong_positive 1.00
CCCGGTGAACTGCATGCACTCATCGAGAGTTCACTGAGTT
PANAPTA:P11473:VDR:PRJEB61115:R4:3ceef6d6b4f3
40 14.29 0.50 strong_positive 1.00
GGGCACGTAGACGCCGAGTTCAGCAGGTTCATCGGGTTCA
PANAPTA:P11473:VDR:PRJEB61115:R4:5c10937bfc56
40 14.28 0.50 strong_positive 1.00
CGTCCACAGCACGACGGGTTCATGGAGTTCACTGAGGTCA
PANAPTA:P11473:VDR:PRJEB61115:R4:490dbd56d0e2
40 14.23 0.50 strong_positive 1.00

SELEX rounds

R1 R4 ·final

Structural & language-model features

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Pre-computed feature catalog (paths only — files served separately).

Residues
427
FASTA
ESM-2 mean
ESM-2 per-residue