P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR11502328

RNAmutFOXR04

Reads
504,356
Distinct strings in file
405,392
File size
5.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB62756
Archive record:
ERR11502328
Sample:
SAMEA113565970
SHA-256
de597c7e84b3578bef6e66366f608a8cddaea0a9b537763345437342aa564f44

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATATTTTCTCACATCGGAAAAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATATTTTCTTATATTGGATATG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATTTTCTCTCACATCACATATG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATTTTTATTCTTTTTCGATATG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGCATTTTTTTTCTTATTCGATATG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCCCAGATCGGTTGAGCA11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCCCCCACATCGGAAGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCACACATCGGAAGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCAGATCGGAAGAACT11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCACATGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCAGAAGAG23.96545e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCAGATCAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCAGATGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGAAAGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGCAAGAG59.91363e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGCATGAG47.93091e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGCTACAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGGAAAGC11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGGAACAG112.181e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGGAAGAG1140.000226031
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGGAAGTG71.38791e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGGAGGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGGATCAG23.96545e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGGATGAG509.91363e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGGATGTG47.93091e-06

Read fractions use all reads in this source file as the denominator.