P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR11502328

RNAmutFOXR04

Reads
504,356
Distinct strings in file
405,392
File size
5.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB62756
Archive record:
ERR11502328
Sample:
SAMEA113565970
SHA-256
de597c7e84b3578bef6e66366f608a8cddaea0a9b537763345437342aa564f44

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGGCAACA11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGGTACAG47.93091e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGGTAGAG152.97409e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGGTTCTG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATCGGTTGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCACATTGGATGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGACCGGAAGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGAGGAAGAGCA11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGAGGAAGAGCT11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCAGATGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCAGTTGAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCGAAAGAG23.96545e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCGCAAGAG61.18964e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCGCATCAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCGCATGAA11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCGCATGAG35.94818e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCGCTACAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCGGAAATG23.96545e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCGGAACAG101.98273e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCGGAAGAG4120.000816883
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCGGAAGTG81.58618e-05
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCGGAGAGC11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCGGATCAG11.98273e-06
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCGGATGAG1220.000241893
AAAAGGTAACACGACAGATCTCCTCCGCCATCCTTTCCTCCACCTCCAATTCAGCCTCAACGGATACTCTCCCAGATCGGATGTG47.93091e-06

Read fractions use all reads in this source file as the denominator.