These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016768
NACC1_CC40NTGAGTAYWCA1
- Reads
- 57,172
- Distinct strings in file
- 56,263
- File size
- 0.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016768
- Sample:
- SAMEA12312953
- SHA-256
- 2471650691269057a8c2fb5d35e2c28f720ddc1fcf0d6fcd0f007beafb405a76
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACGGGTGGTGCGTGTGCCTATTTCGTGTGTTGCCAAGTTA | 1 | 1.74911e-05 |
| ACGGGTGGTTATACTAGTGTTGCCCTATGTGTGATCCGGG | 1 | 1.74911e-05 |
| ACGGGTGTGGTTTGGTGGAGAGCCGGTCATTACGTTGTTC | 1 | 1.74911e-05 |
| ACGGGTTCATTCACTGCTTCCCTGATGTTTGCATGTGGCA | 1 | 1.74911e-05 |
| ACGGGTTCCGTGTATACAACCCTGCGCTTATGCTTGTTAT | 1 | 1.74911e-05 |
| ACGGGTTCGTGGGAGCGAGGTATGGCACATGTAAAGCGCA | 1 | 1.74911e-05 |
| ACGGGTTCTTCCGTGCAGACTAGTTCCTGATCCTCGCGGG | 1 | 1.74911e-05 |
| ACGGGTTGACTGGGCAATGTAGTAGACAGGGTTGGAGTGG | 1 | 1.74911e-05 |
| ACGGGTTGTGCACATTTCGGTGGGAAGGCGGGGTCCGGAT | 1 | 1.74911e-05 |
| ACGGGTTTCGCTGTCGTTGCTGTGCGGGAGGCGGTGTGTT | 1 | 1.74911e-05 |
| ACGGGTTTGGACCGAATGTATGCGCTCTGACGCTGCAACA | 1 | 1.74911e-05 |
| ACGGTAACGAATGTGTTACGGGCGTTTGTGGGATGGAGCA | 1 | 1.74911e-05 |
| ACGGTAAGTCCCAAGTTAAGTCGTTTCGGGGACGAAGTCA | 1 | 1.74911e-05 |
| ACGGTAATAGCCTGGTGAGGGAATGAACATTCAGAGCTGA | 1 | 1.74911e-05 |
| ACGGTACAGAATGGTAGCGGTGCAGGCATGTTGAAGTGCA | 1 | 1.74911e-05 |
| ACGGTACATTTGGGGGAGTAGGCTAGCGTCACTAACGGTC | 1 | 1.74911e-05 |
| ACGGTAGACTGTGGAGAACGGTACTATCGAGATGTAGTGG | 1 | 1.74911e-05 |
| ACGGTAGAGGCGGTGGGGACGTCGAGGGGTATAGGTGTTT | 1 | 1.74911e-05 |
| ACGGTAGATGATTAAGACCTTGTGATCATGCGGGCCGCCT | 2 | 3.49822e-05 |
| ACGGTAGCTGAAGTGTAGCATGCTCTATATGACATGCGGG | 1 | 1.74911e-05 |
| ACGGTAGTTATCGAGGATCATGCTGGGCATGCCGGCGCAA | 1 | 1.74911e-05 |
| ACGGTAGTTGTTTTAGGTAAGAAATGGCAATGGCAGCTGC | 1 | 1.74911e-05 |
| ACGGTATGACTCTGTGCAAAGGCGACGGGGGGAGTGGGCC | 1 | 1.74911e-05 |
| ACGGTATGATAGTCATGTGTATGTCCTAAGTTTGGTATGA | 1 | 1.74911e-05 |
| ACGGTATTCGTGTGTCAAAAGTAATTGCAAGGGACGTGGC | 1 | 1.74911e-05 |
Read fractions use all reads in this source file as the denominator.