These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016768
NACC1_CC40NTGAGTAYWCA1
- Reads
- 57,172
- Distinct strings in file
- 56,263
- File size
- 0.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016768
- Sample:
- SAMEA12312953
- SHA-256
- 2471650691269057a8c2fb5d35e2c28f720ddc1fcf0d6fcd0f007beafb405a76
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACGGTCACACTTCAGCATGTAAATTGTTGGGTACGCGTTA | 1 | 1.74911e-05 |
| ACGGTCACTCGTGGCTGGCAAATGGTGGTTTGTTTTTATC | 1 | 1.74911e-05 |
| ACGGTCATACATGGGCTTGGCAAACACGGTTGTGTAGATT | 1 | 1.74911e-05 |
| ACGGTCATATATTCTTCATGCAGTCGATGTCATGGGCGGG | 1 | 1.74911e-05 |
| ACGGTCCGGTATATTGTTCAAGCATGGTTAAAAGCGGACA | 1 | 1.74911e-05 |
| ACGGTCGCGTGGCAACGCTTTTGTTTCAGATCTGGCGGGA | 1 | 1.74911e-05 |
| ACGGTCGGCCGTTTGTCCAAGGGGTCACTACCGTCTCTCC | 1 | 1.74911e-05 |
| ACGGTCGGTAGTAGTGTGTAACGTAGGGTGCAGTGGTTGG | 1 | 1.74911e-05 |
| ACGGTCGGTGCGACGAATGGAAACGCGGTGCAGTCTGGGG | 1 | 1.74911e-05 |
| ACGGTCGTGACCTCACCCCGGTGCTCGGTCGCGGAGGAGC | 1 | 1.74911e-05 |
| ACGGTCGTGAGCTCTACCATATGTAGATGATTGCCAAACC | 1 | 1.74911e-05 |
| ACGGTCGTGATGGAGGGAGTAGCATATGTTAGAGTGAGCC | 1 | 1.74911e-05 |
| ACGGTCGTGGAGGGTGCGTGGGGTAATCGCATGGGAGCCA | 1 | 1.74911e-05 |
| ACGGTCGTGTGGGGTCCGTGTCATATGTGACCTGTAGGTT | 1 | 1.74911e-05 |
| ACGGTCTCGTGCCTCGATCCATGTTTGCGGGAGGTTGTCA | 1 | 1.74911e-05 |
| ACGGTGAAGGCTATCAATCGTGACGTGTTGTTGCCATAGA | 1 | 1.74911e-05 |
| ACGGTGAGACAGGCGGTTAGTACCAAAAGACGAGCGCTGA | 1 | 1.74911e-05 |
| ACGGTGAGGACAAGATAAGAAGAGAAGCTTATCGTGGGCG | 1 | 1.74911e-05 |
| ACGGTGATGCTAACGAAGGTGAACAGTCTTATGGCGTGCG | 1 | 1.74911e-05 |
| ACGGTGATGGCATTCTCTCATGTGTCGGTGAATTGGAGGT | 1 | 1.74911e-05 |
| ACGGTGCACTCATGTAAACGCACCGTTCTAACACGACCTT | 1 | 1.74911e-05 |
| ACGGTGCAGTGCAACACGCATGTTAGTGGCATAGTAGACA | 1 | 1.74911e-05 |
| ACGGTGCATGGGCATATGTAATGATTTATCGGGGTGTTCG | 1 | 1.74911e-05 |
| ACGGTGCGTGTACTCTCCCATGTACGCAAGCAGAATTGGT | 1 | 1.74911e-05 |
| ACGGTGGAGGGGTAGGAGACTGTCCGTCCTAAGGTTGTGA | 3 | 5.24732e-05 |
Read fractions use all reads in this source file as the denominator.