P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAACGCCGGAGTGGGAGATCTAGGTCACCCGTGGAATGT12.30519e-06
AAAACGCCTCACGCGGGGCGTGGCACGTCTGTCCACGCAC12.30519e-06
AAAACGCGCGAGTGTGTACGTGGTCGCGTGGAGTGGATGC12.30519e-06
AAAACGCGTGGATCGCGTGATTGCGTAGGGTGTTTGTTAT12.30519e-06
AAAACGCGTGGGGTCGGACGGTCACGGACAGGGTATGTGA12.30519e-06
AAAACGCGTGGGTGTGGGTGGCTCGTGGACGTTTTAAATG12.30519e-06
AAAACGCTCTATCGTTTGGCCCTGCGCGCACTCGTGACTT12.30519e-06
AAAACGCTTGCCATTCCACGCGAAGTGGGTACAGTTCGTG12.30519e-06
AAAACGGCGGATAACTAGGTCCACGCGTGACTCCCTACGG12.30519e-06
AAAACGGCTCTGAAGCACGTGGGGCAGCCGAGTGGGAATG12.30519e-06
AAAACGGGTGTGGTTTCGGGATTTTCCACGCGTGGAGACA12.30519e-06
AAAACGGTAGTCGCCCAGCGGTGGGGGCATGACTGGCCTG12.30519e-06
AAAACGTATCACATTTCCACGACTATCCACATGTTGTACC12.30519e-06
AAAACGTCACGGGCCGTCAGTCACGCGTGGTGCGTCGTGT12.30519e-06
AAAACGTGCACACTAAAAAAGCACGAGGTGTTCGTAAATA12.30519e-06
AAAACGTGGACCGTGGATTTGCGCACTATCTTTGCAGGCA12.30519e-06
AAAACGTGGGTTGGGCGACGGGAGTGCCGGCGTGACGGCG12.30519e-06
AAAACTAATGCGCGCTTGTCAAGTGCTTACTACGGGGACA12.30519e-06
AAAACTCCACCCGTGGGGGAGTACGTAGCGTGTGGACGGG12.30519e-06
AAAACTCCCACGCGTGCAAGATTAGGCTGACCTATAGCAT12.30519e-06
AAAACTCGCGTGGCGCTGCTGCTCCGTGAGAGTGGGGTCG12.30519e-06
AAAACTGCGCACAGTCGGTGTCTGAATAGCGCGTGGGCAT12.30519e-06
AAAACTGGACGGCCTTCAGAACAAGAGCGTTTCTCCGTTA12.30519e-06
AAAACTGTGGTTGGCGTGACAACTGCGTGGAGCAATGGTT12.30519e-06
AAAACTTCGTGGGGACGGTCATCTGCGTGTCGGACACATG12.30519e-06

Read fractions use all reads in this source file as the denominator.