P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAACTTGATTAGTCGTTCACGCGTGGCGTTGTCTCCGTC12.30519e-06
AAAACTTGGATTGTGCTGTGCGTGACTATGCAAGTGGGTG12.30519e-06
AAAACTTTTCTGTGCGTGGGAAACTTCGGTCAATCGTACC12.30519e-06
AAAAGAAAAACGTTGGGCGGTACGGGTGTCACGAGTGGGA12.30519e-06
AAAAGAACCGATGATGCTAGGACGGCGCACTGATTCATCG12.30519e-06
AAAAGAATCACGCGGGTTCCTTGTGGAGAGTGGATATAGA12.30519e-06
AAAAGACCCCGCACGCGTGGGTACGTTCACTCGTGGGCAA12.30519e-06
AAAAGACCGGGGGGCACATGCGCTGTGGGGTTATTAGTCG12.30519e-06
AAAAGACGTGTGGACCGGCGTGGACAGTTCCACAGTTACG12.30519e-06
AAAAGAGCCGATATTGTGGTCGTGGGCGGTGTGAATGCAA12.30519e-06
AAAAGAGGCTGCGTGGGTTCGTGAAACGAGGTGAGCGGGC12.30519e-06
AAAAGAGTCTACGAGGTCACGCGTGGAGAGTACATGTGCC12.30519e-06
AAAAGATGGATGACGATCTTGCCACGCGCTGTGGGCGGTG12.30519e-06
AAAAGATGTCCACTCGGTTCACTGGCGTGGGGACGTCAGC12.30519e-06
AAAAGCACCAGGGCGTGATTGATAGTGGGGGGCAGTCTAA12.30519e-06
AAAAGCAGTCCACGTCGTGTGGAGTGTACGTGGGTCGACG12.30519e-06
AAAAGCATGAATCACGCGTGATGTTTGGCGCGTGCCGTGG12.30519e-06
AAAAGCCACGCGTGGGGAAGCCATTACAAGGGGCTCGGCG12.30519e-06
AAAAGCCGCGTGGATGTACGGGCGGTCACCGAGCCGGGTA12.30519e-06
AAAAGCCTGACACGCGTGTAGCTTCCGTGGCGTGACTTTC12.30519e-06
AAAAGCGCCACGCGTGGCCTTGGGTCTGGGATTGCGTGTT12.30519e-06
AAAAGCGTGAGGTATCGACGTGGGGGGGAAGCCACGCTGC12.30519e-06
AAAAGCGTGGATTACCGTGGGTGGTGGGGGGAGAATGTCG12.30519e-06
AAAAGCTGCGCACGCGTGGGTGCGGCATGCGTCTACATAG12.30519e-06
AAAAGCTGGCAAGGGGGAATCACGCGTGAACGCGCTGTTC12.30519e-06

Read fractions use all reads in this source file as the denominator.