P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACACGCGGCTTCGTCAGCATCATGGGTAGTCGTGGATAG12.30519e-06
AACACGCGGGCCCGTGGGAGGTGTTCCACGTGGTTCGTGA12.30519e-06
AACACGCGTGATTATTGGGCCCGAGGAACGCGTGGTAAGT12.30519e-06
AACACGCGTGATTCACATTCACGTGGGATGGCCAAGGTAC12.30519e-06
AACACGCGTGCGACCGTGTTAGTGGTTGTGGACGCCCCAC12.30519e-06
AACACGCGTGCGTGTTTTACTGGGTCCCGTGGCTTTCCGT12.30519e-06
AACACGCGTGGAAATGTCACGCCAAAAACATGCAGGACTC12.30519e-06
AACACGCGTGGAAGGAGAGGTCAGCGTGGCACCTGCGTGG12.30519e-06
AACACGCGTGGACGGTTATCGTGCTGGCAATTAGGTTGGA12.30519e-06
AACACGCGTGGATGGTGAGCGGAGTGCATGTTATTCAGTT24.61038e-06
AACACGCGTGGCATTAGCCTAGGGTGCCGTGTGTCTAGGG12.30519e-06
AACACGCGTGGGATAGGGAGCGTGACAGTGGGGTCAAGCA12.30519e-06
AACACGCGTGGGGAGGTACAGGGCGGTGCTCACGACACGA12.30519e-06
AACACGCGTGGGGTGTCTAGGTGTTTTCTCGGGGAACGAA12.30519e-06
AACACGCGTGGGTACGGACGGAGTGGGAGGGCGATAGTGC12.30519e-06
AACACGCGTGGGTCCACTGAATTGTCTCTGGTTAGCAGTA12.30519e-06
AACACGCGTGGGTTGGCTGGTGCCGCTAGGTGGTGCCGCC12.30519e-06
AACACGCGTGGTGGATGGTCGCTACACGCAAGTGGGCAGC12.30519e-06
AACACGCGTGGTTAGGAACGCGAGTTTGAGTGGGGACTGC12.30519e-06
AACACGCGTGTAAAGCAACGGAATGACACGCCCGTGGACG12.30519e-06
AACACGCGTGTTAGGGGGGAGTACGGAGCTCCCGTGGAGC12.30519e-06
AACACGCGTGTTCTTAGTGAGTGTGCCACGTATTTCCAGG12.30519e-06
AACACGCGTGTTTTCCCGTGTTTATGGCTCTCGTACAGCG12.30519e-06
AACACGCTCTCGTGGGGCTGGGTTATTTCGTTACGTGCAT12.30519e-06
AACACGCTGAGCGTGGATTGAAGGCGTGGAGATGTTGTGG12.30519e-06

Read fractions use all reads in this source file as the denominator.