P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACACGCTGGGTGGGTTAGGACGGGGGTCCCGTGGATCTG24.61038e-06
AACACGCTGGTGGACGAACCAACATTTGCGTGGGTGTGGA12.30519e-06
AACACGGCCACTCGTGGAAAAACATCTGAGGGTGTGGTTT12.30519e-06
AACACGGCGAGCGTGGGAAAATTAACCCACGGTCTAGTGA12.30519e-06
AACACGGCTGCGCGTGACCTTGCGTGGACGTGGGCGGGCA12.30519e-06
AACACGGGCCAGTGGGTGTAAGATGTTGTGCGTGGGTGTT12.30519e-06
AACACGGGCGCGTGGAATCTAGTGGGACACGGGAGGGGAT12.30519e-06
AACACGGGCGGACGTGGACATGGGGTAGTGGGGCTTATCC12.30519e-06
AACACGGGCGGCGCGTATTTTCGTGGGCCGCGCGTGGACC12.30519e-06
AACACGGGCGTGCGTTCCTGGGCAAGACCTGAGATCCACG12.30519e-06
AACACGGGCGTGGTACGCTTGTCGGGGTGCGTGGTGTTGA12.30519e-06
AACACGGGGAGTCTGGCGCGTGGGCCTCCGTGGATGGATG12.30519e-06
AACACGGGTCACAGTTCATACATTCACGATAGAACCAAAT12.30519e-06
AACACGGGTGGAGGTGGCATCAGGCTCGTGAGTGGTTCGA12.30519e-06
AACACGGTACGTGAGTTCTCCAATACGGTACCCACGCTCC12.30519e-06
AACACGGTGTCTACACTTTATCACACGCGTGGAGGTGTCA12.30519e-06
AACACGGTTGGGGCGCCACGCGTGGAACGGAGTGGGGTTG12.30519e-06
AACACGTAACGGTCAGTGGGTTGGAGTTCGTGCGGCGGTC12.30519e-06
AACACGTAACGGTGGTTTGGTTGGGAGGTTACGTATTGGT12.30519e-06
AACACGTAGGCGTTCGTGGCGTGGTCCAGATCGTGCAGCG12.30519e-06
AACACGTATACGTGGATAGCAAATTACGGGCTGCGTGACG12.30519e-06
AACACGTATGGTCGCGTGGGCGTGGAATGTCGTACTGTGT12.30519e-06
AACACGTCACGCGTCGTGGACTTGGTTCTTATGGTGGGAA12.30519e-06
AACACGTCCAAATGTGTCGGCTGCGTGGGATGTCGTCATG12.30519e-06
AACACGTGAATCTGCGTGGTTGCCCGTCCGAGTGAAACTG12.30519e-06

Read fractions use all reads in this source file as the denominator.