P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACGGAAAGGCTTTCTGTCTGTGTGATCCACAGCAGTGAG12.30519e-06
AACGGAAAGTGCGTGGGAATTGCGTTCGTGGGGCTAGTGG12.30519e-06
AACGGAACATCACGCGTGGGTCTGGGTCGCGGGGCCCGTG12.30519e-06
AACGGAACTCGTGGAGGGGCTATGTTGATGTCGTGGGAGC12.30519e-06
AACGGAAGGGCCCACGACCCGTGGCATATCACGGAAGCAT12.30519e-06
AACGGAATACACGATGTATGATCGCGCGTGGGTTGTTCGA12.30519e-06
AACGGAATGCGTGGAACTACGGTTGCGTGTACTGAGGGTT12.30519e-06
AACGGACACGCGCGCGTAGTGGGAGTGGGTTGGCGAGGGC12.30519e-06
AACGGACACGCGTGGTCGTGGGAATCCGTCCGTGGTAGGG12.30519e-06
AACGGACACGTCTTTGCGTGGATCTCGGTCGCGCGTTTGA12.30519e-06
AACGGACAGCGTGGATTACTCAGTACGTGGAATCGGTCCA12.30519e-06
AACGGACCTATAGGTGGGCAAGTGGGGTAACGTCGCCAGC12.30519e-06
AACGGACGCGTGAATCCTGACCGTGGACAGTTTAGCCCCC12.30519e-06
AACGGACGTTATTAGTCACGCGTGGCGTCAGCAACTGTGA12.30519e-06
AACGGACTGCGTGGGGAGGCACGATGTGGGTTCCTCGTGA12.30519e-06
AACGGAGCGTGGCATGCGTGGGTGTGTTGTGCGACGCCAC12.30519e-06
AACGGAGCGTGGTTAGGGCGCAACGTCCCCGCGTGGGTGT12.30519e-06
AACGGAGGGCGGCCTAGACTCGCGGGATGCGGCCCGTGAT12.30519e-06
AACGGAGGGTTGTCGCGCAGCGTGGGAGGGGAAGTGGGAT12.30519e-06
AACGGAGTATGAGTTGTGCCACGCGCGTGGGGAACGGCAG12.30519e-06
AACGGAGTCACATCCACGTAGTTGCGTGGGATTGTAGCCC12.30519e-06
AACGGAGTGGAATGGTCATTCTTCCACGCGTGCAGTACTG12.30519e-06
AACGGAGTGGAGGAGAAAGCGCGAGTGTTCACGCGGAGTA12.30519e-06
AACGGAGTGGGTTACGTGGGGATTGCCCGTGTCACGCGTA12.30519e-06
AACGGAGTGTGGGGGGCAAGCCTGGCTTTCTCCCACGCGG12.30519e-06

Read fractions use all reads in this source file as the denominator.