P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACGGAGTGTTCGTGTCCACGTGTGGCATTGTGACCGATT12.30519e-06
AACGGATAACGTATCGGTGCGTGGGGAGGACCTGTTAGCT12.30519e-06
AACGGATCGCTGTGTCGTGGGCGTAACAAAAGGGTTTCCA12.30519e-06
AACGGATCTGCCACGTCAAGTGGGTCGGGTGGGGGATGTC12.30519e-06
AACGGATGACGCGCGTGAGAGTATGTCGGTTTGACACTGG12.30519e-06
AACGGATGATGAGTGGCATTATCAGCCTCGTGGCGTGGGA12.30519e-06
AACGGATGGGGCATTATGGAGTACAGGTGTTGTACCATGT12.30519e-06
AACGGATGTCACGTGTCAGGCGCGTGGGAGCGTGGGGTTG12.30519e-06
AACGGATGTGGATACCACCGCCGCTGCCTGCATGACCAGC12.30519e-06
AACGGATGTGGGCTTGCGTGGACGAGTGGAGCACAGTGCA12.30519e-06
AACGGATTCCGGGAAGGCCTACACGCAGAGTGTGCGTGAC12.30519e-06
AACGGATTGCCCTGTGGGCGTCGCGTGGGCTCGTGGGCCT12.30519e-06
AACGGATTTGCGTGGGGTAGGGCGTGTTTGGGTGGAAAAT12.30519e-06
AACGGCACATCGGTGGGCCCGCGTCATCACGCGTGGGAGT12.30519e-06
AACGGCACGATGCGTGGGTGCGTGGATAACGGGTGCGGTA12.30519e-06
AACGGCACGCGTGGCATAGCGTGAAGCGTCTCGAGCGTAC12.30519e-06
AACGGCACGTGAGTGAGGTGCGTGGACGTGGTCCGGGAGT12.30519e-06
AACGGCACTCGTGGTCCGGAGTTAGGAGTTGCGTGGGGTT12.30519e-06
AACGGCAGGATTTGCGTGTAAGGACTACTGCGTGACTACT12.30519e-06
AACGGCAGTAGGGTGATAAGTGTACAAAATACCCACGCAC12.30519e-06
AACGGCAGTCTAGAGCAGGGGGCGTGGGGAGATGCGTGGA12.30519e-06
AACGGCATCGTGTGTGGGGGGCTGGTATAGCGCATCGCGG12.30519e-06
AACGGCATGGAGTCTAGGGGCCGGATCTAAATTCACGCGG12.30519e-06
AACGGCCCACGGCCCCCTGGGGAGGACGCTCCCACTGGGT12.30519e-06
AACGGCCGAGAGTGAAGGGGAGCGACCTGCCCTGCCCTTC12.30519e-06

Read fractions use all reads in this source file as the denominator.