P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACGGTGCACGAAGGCCGCGCGTGGGTGCGTGACTTACTT12.30519e-06
AACGGTGCCACGGGAAGGTCGCGTGTCATGCGTGGGAAGG12.30519e-06
AACGGTGCGACGGGTACTGGCTACGGCTCGTGGAATGGCC12.30519e-06
AACGGTGCGGCTGGGTCCACGCAGCACGGGCATAGGGCCG12.30519e-06
AACGGTGGCTAGATGGGTCGGTAAGTTGTGCACGCGTGAC12.30519e-06
AACGGTGGCTATCGCGGGATTGCGCGCCCGTGGCGTGGGA12.30519e-06
AACGGTGGTAACCACGCGAAACACTCGTGGGTTGGCGTGG12.30519e-06
AACGGTGTCGGTGTGAGTTTGATGTTTGCGTGGTACCCCG12.30519e-06
AACGGTGTGGGCTTGGGTTGCGTTGCCGTTAAACGGGGGA12.30519e-06
AACGGTGTGTAAATCTGTGGGTTTGGCGTCCGCGCGTGGG12.30519e-06
AACGGTGTGTGATTTTGCGCAGATCCACTTGTGTTGTACG12.30519e-06
AACGGTGTTAGTGGATAAGCGTGAGTGGGGTGATCGGCAC12.30519e-06
AACGGTGTTCTGCCAGCGTGGGCGTTGTGCCATCGATGCC12.30519e-06
AACGGTGTTGAGGCCCGTGTGCGTGGGATTGCGCGTGGGC12.30519e-06
AACGGTGTTGTTTCGTTTCCACGGTAAGCTTACGTGGGTT12.30519e-06
AACGGTTCCGTTTCGTCACGAGTGGGCAGAAGTGGGCGCC12.30519e-06
AACGGTTCGGGCGTGGGCGCAGGCTTGCGTGCAAGGCTCC12.30519e-06
AACGGTTCTTGTGCGTGGAAAGCGTGGATGGTTCCTCTGC12.30519e-06
AACGGTTTATATGGGGTGCGACACGGGTGTACCCACGGGG12.30519e-06
AACGGTTTGGGAATTGTGGTTCTAGTCCCACGCGGGTATG12.30519e-06
AACGGTTTGTGCGTGGAGTGGATATAGTTCGTCGTGCGCT12.30519e-06
AACGTAAATATGTCACGCGTGACGAGGTCGTTCGGCGTGT12.30519e-06
AACGTAAATGTACCCCGGTATTTCGTGAATGACGGGAACA12.30519e-06
AACGTAACCGTGGATTTGGGCGTGGGCCGGTAAGGGACCC12.30519e-06
AACGTAAGGCTGTGGTTATTAATTCCCCACGTGAGTGGGG12.30519e-06

Read fractions use all reads in this source file as the denominator.