P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACGTAAGGTCACGAGTTGACGCGCGTGGCCGGCTGAGGC12.30519e-06
AACGTAATCCACGGAAGTCCCACGATCGCAGTCGCGAGGT12.30519e-06
AACGTAATTCCACGGACATTGCGTTAGCTGCACCAAGACC12.30519e-06
AACGTACACGGGTGGTGCGAGTGGGATCGTGGACATGTGC12.30519e-06
AACGTACAGTGGGTGTGAGTGTCGCGTGGACGGGGTGCGG12.30519e-06
AACGTACATAGCGTGGGATGGTGGGACGTGTGTGGCGTGG12.30519e-06
AACGTACATTGGACCTAGCGGTGGAGCGGATTGAGGGGAG12.30519e-06
AACGTACCCACGCGTGATTCGACGATAGGCGTCAATGTAT12.30519e-06
AACGTACGGCGTGGAATGTAGCCAGAGTGGGCGCGGGACT12.30519e-06
AACGTACGGCGTTTAAGCGCGTGGGATTTCGTCGCGTGGA12.30519e-06
AACGTACGGGGTGAAGGATTGGCGTGGTAGTGTCGTGGAA12.30519e-06
AACGTACGTGGAAGGCTTCCAGTGGGGAGGTTTCCACGAA12.30519e-06
AACGTACGTGTGAAGTATCGCTAATCGCGTGGAATCTAGC12.30519e-06
AACGTACTGAGAAGAAGCGTGGCCTGTCGTGGACGTTGCT12.30519e-06
AACGTAGAATGCGTGCTGCCAGTCCTCGTGGGCCGGGCCG12.30519e-06
AACGTAGAGGTCGGTAAGGCGCATCCTAAGGGGCACGCAG12.30519e-06
AACGTAGATCGCTACTGCGGGTGCGGGGTAATACAGTACA12.30519e-06
AACGTAGATTTCCACGTGTGACGTGGGGAGGAGACGTCGT12.30519e-06
AACGTAGCATACCCACGCGTGTATGATACAGATAGGTGCT12.30519e-06
AACGTAGCCGTGGGGCTTGGGGGAGAAATCTTGAGTGGGC12.30519e-06
AACGTATCGAAGTATCGCGTGGAAAGGGTTACTCAGTGTA12.30519e-06
AACGTATCGTTAGCCCCTTGAAGGATCTGCGTGGGATGTA12.30519e-06
AACGTATCTAAGGACTACACGTGGATCGGCGTGGGGTGTC12.30519e-06
AACGTATGTGAAAAGGCTGCATTGTGACGTGTGGGGCCTT12.30519e-06
AACGTATTCCTAGTCTCGGGTTTACGTGTGCGCTGGGGCC12.30519e-06

Read fractions use all reads in this source file as the denominator.