P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACGTATTCTATGTAGCATCAGCGACGTGGGCTATTAAGA12.30519e-06
AACGTCAAGAAGCCGTTACACGATGACCACGCGTGTCGCT12.30519e-06
AACGTCACGCGCGGAAACACGAAACGTGCGGGGAATAGAG12.30519e-06
AACGTCACGTGCACACACAGGGTTTCTGTAGGGCGTGGAA12.30519e-06
AACGTCAGTGGCGTGGGTTGAAGGGTGCGTGGGTGGCGCG12.30519e-06
AACGTCCACAGGTCAAGCTGTGTGAGAGCAGCGGCGTCCA12.30519e-06
AACGTCCACGGACGGGACGGTAGCACGTGTGTACCCACCC12.30519e-06
AACGTCCACGTATTCGTGACACGTTGCCGTGGAGGATGGG12.30519e-06
AACGTCCAGTGCTCCACGCGTGAGGAGGCCACCCTTCACG12.30519e-06
AACGTCCGTGGCCCGTGGCACGTTCACGCGTGGTAGTTGC12.30519e-06
AACGTCCTCGTACGGCAAGGCGCGTGGATGGTTCTTGCCT12.30519e-06
AACGTCCTTACTGCGTGGATGTGAAATCGCGTTAGCAGCC12.30519e-06
AACGTCCTTTGGGGAAGCCCTGCGTCACGGGTGGGAGGTT12.30519e-06
AACGTCGAAGTACTTCGCTGACCTGCGGAGTTTGTGGATA12.30519e-06
AACGTCGCACTCCCACGCGCTGTGGAGTCCGAGGGGGGTG12.30519e-06
AACGTCGTCAATTTACACGGAAGGTACTGATCCGAGTGGG24.61038e-06
AACGTCGTGCCCCCACGTGACTAAGATTATCGAGAGTGGG12.30519e-06
AACGTCGTGGATTGCGGCGGCGGTGACGTGGCGTGGGGTA12.30519e-06
AACGTCGTGGGAGGTTAAGCAATTATAGAGTGGGTGAGTG12.30519e-06
AACGTCTACTTTGGCCACGCGTGGCAGTGAACTGTGGGTG12.30519e-06
AACGTCTCCGCGTGGAGTGGATATATCACATCGCTCAACG12.30519e-06
AACGTCTCGAGGGGTGTATGCGAACGATCCCTGGCGTGGG12.30519e-06
AACGTCTCGCGTGGGAAGTGTAGCCCGGTTGCTGGTGGGC12.30519e-06
AACGTCTGCGTGGGGTGCCGGTGTTAGGTGGGGTGGTCCT12.30519e-06
AACGTCTGTACGAGGTTGTTTGCGGCCACGCGTGATCTGA12.30519e-06

Read fractions use all reads in this source file as the denominator.