P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGACACGCGCGTACTCCGTGGGACCGCGGTGGGCAGCCC12.30519e-06
AAGACACGCGTGGGTTATGGGATGTTCGTGCATACAAGAA12.30519e-06
AAGACACGCTCAGCAGTTGGTGTTAGCCGATGTACGTGGG12.30519e-06
AAGACACGGCAGACGTGAGATGCGCGTGGGAGGGCCTCAG12.30519e-06
AAGACACGGGGATGTGGTCTGTGATGACAACGTGGGTACA12.30519e-06
AAGACACGGGTGACGTATGTTGCGTGGGGATCTCATGCAG12.30519e-06
AAGACACGGTGCGTGGCGTGATTGACGTCTCGCGTTGACG12.30519e-06
AAGACACGTGGGGCCCACGGGCAGCGTGTGCGGGTGGACT12.30519e-06
AAGACAGAATCGGTGCGTGGACATGGCTGGTCTGAGTGGC12.30519e-06
AAGACAGCAGACTGGAGTGTGTACTTCCACGGGTGGACAT12.30519e-06
AAGACAGGGTTGTGCGCGAACCCACGCGTGAGTAGTGGTT12.30519e-06
AAGACATCACGGGAATCCACGAACTGTGCTCGTGGCATCC12.30519e-06
AAGACATCATAGTCCACGTGTCAGCGTGGGCTGGTGTGGT12.30519e-06
AAGACATCCACGAATGGCAGGTTCACGCGTGGTCCCTTGG12.30519e-06
AAGACATGAGTGGGGCAGCCTCGTGGGTACGGGTTAGTAT12.30519e-06
AAGACATGTCCACGAAGTGGGAGGAGGTCGCTGCCACGCG12.30519e-06
AAGACATGTTAAGCAACGCACAAAGGCACGGTACTATTGT12.30519e-06
AAGACCACGAGTGGGCTTGAGTGAGCTACGTGGGTGCGGC24.61038e-06
AAGACCACGGAGGTGGACGCGTGGGATGTTAAAGGGGGAC24.61038e-06
AAGACCACGGGTTCGCGCGCCGCCGGTACGTGGTTTTCCA12.30519e-06
AAGACCACGTATTTGACGTGGGTGGAAAGCGGAGTACACG12.30519e-06
AAGACCACGTCGATCACGCGTCTGTGGCTTGCAGACGGCA12.30519e-06
AAGACCACGTTGCGCTCACGCGTGGGATGCTTTCGTGGCA12.30519e-06
AAGACCATAGTGATGAGGCGTGGGAAGATAGGAATACCCA12.30519e-06
AAGACCCACGCACGGGGGTGAAACCGTGACGGATAGCAGT12.30519e-06

Read fractions use all reads in this source file as the denominator.