P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGACCCCACAAGTCTGTGTGGGTTGCGTGTCGTGGGCGC12.30519e-06
AAGACCCGTGGATTTATTGAGGCCCGTGGGGGCGCGTGGG12.30519e-06
AAGACCCTCACGGCTCGTGGATCATGATTCGTGCGTGGAC12.30519e-06
AAGACCCTTGACTAGGCAAGTGGCGTTGAGTGGGAGTGGA12.30519e-06
AAGACCGATGATACGCGTGGGAGCGTTTCTCGAGGAATGA12.30519e-06
AAGACCGCGCCCGGGGTGGCATTTGCGTGGGGCCAGTTTG12.30519e-06
AAGACCGGAAATTGACAGTGGCATCCTCGTGGACAGCTGG12.30519e-06
AAGACCGGAAGTTGCGTGGGGCAAGCCGTACGGATGGAGC12.30519e-06
AAGACCGGTCTTTCGGCGCGATTCACGCGTGGGGCATGCA12.30519e-06
AAGACCGTCACCCACGTGGAAGAGTGGTAACGTTCCGTGA12.30519e-06
AAGACCGTGGATTTGGAACGCCCCCGCGTGGGTAAGATGC12.30519e-06
AAGACCGTGGGATTATTCCACGCTGATATAGTAATGTGAG12.30519e-06
AAGACCGTGTGTGGAACGCGGAGAGTGACTAGTGGGCCCA12.30519e-06
AAGACCTAGCGTGGAACTCCGAGTCGCCGCGCGACCGTGG12.30519e-06
AAGACCTGATTGATTTTTGTGCGTGGGAAGTAGGGGCGTA12.30519e-06
AAGACCTTAACCCCACGGCGCGCCCACGTTATGCATATGT12.30519e-06
AAGACGAACGTGGGCGGGGTTGCTCTATGACCGCCCGTGG12.30519e-06
AAGACGAAGATGTACGCTACCCGTGGGAGGGAGGCTCTAT12.30519e-06
AAGACGAAGCGTGGGGGCTTGGCTAGATTGCTGTGGTGGT12.30519e-06
AAGACGACACTCGTGGAATACGTGTCCGCCCTCGCCACTG12.30519e-06
AAGACGAGATGCGGGTGGTCCGCCGGTCTCACGCGTGGGT12.30519e-06
AAGACGAGCATGTAGTTGCGTGGGGGTCGTGGGGTGGCAG12.30519e-06
AAGACGAGCCACACGCTGTCCACGAGGGTGAGCGAGACTG12.30519e-06
AAGACGAGGAACATCTGGCGTGGAACGGCTCCGTGGGCGG12.30519e-06
AAGACGAGGAGGATCCGTGGGCTGGTGCTGTGGATCTGTC12.30519e-06

Read fractions use all reads in this source file as the denominator.