P PanApta
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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGAGTGGGGGCAGGTGAGTAGCGGTCCAGCGTGGCGGAA12.30519e-06
AAGAGTGGGGGGGACGTGACCAACGACCACGACTAACCGC24.61038e-06
AAGAGTGGGTAGGATAGGCGGAAGCGTGGGTCTTATAGGG12.30519e-06
AAGAGTGGGTATGCAGGGTGGATGCGTGGGGGCGCGGTCA12.30519e-06
AAGAGTGGGTCGGTCTCCCACGTGGAAGTGCGCGCGGGAC12.30519e-06
AAGAGTGGGTCGTGGTTGCTACAACTGCCTGTGCGCAACC12.30519e-06
AAGAGTGGGTGTTAGAGTAGGTGATACTAAGCTTCGTGGG12.30519e-06
AAGAGTGGGTTAGAGCGAACCTTCGTGATTTGTGGCGCTT12.30519e-06
AAGAGTGGGTTAGGGATAAGGCGTGGATGGGCTCCCTCGG12.30519e-06
AAGAGTGGGTTGTGAGTCACGGGGTGCGTGGCTGTTGTTC12.30519e-06
AAGAGTGTACGCCACGCGTGGTCAGAGTGACGTGGCGGGC12.30519e-06
AAGAGTGTGGTGGGTACCGCGTCCACGCCACGTAGAGTGG12.30519e-06
AAGAGTGTTCGCGTGGATTCAGACTGTTTGGCCGTGTGCC12.30519e-06
AAGAGTTACGCGCGGGACTCGAGTCGCAGGACGGGGGTTT12.30519e-06
AAGAGTTCACGGACGTGGGTAGTCAAGAGGGTCGTGGTTG12.30519e-06
AAGAGTTCCGTGTGTGAGGGAATCGCGTGATTGGCGTGGG12.30519e-06
AAGAGTTCGATGCTCCGGGCGTGGGTGATGCGTGGGTGTG12.30519e-06
AAGAGTTCGTGGAGTTGCGTGGGTGCGCGTGGGGTACCCG12.30519e-06
AAGAGTTGGGGGTGAGTGGGTTCTCCCGTGATCGTGAGAC12.30519e-06
AAGAGTTTCGTGCGTGTCGCGTGGGTTTTTCAGGAGACAG12.30519e-06
AAGAGTTTCGTGGACGGGGATTAAAGTAGGTCCCCACGGC12.30519e-06
AAGAGTTTGTTTGTTCGTGGCATATGATGCCACTCGTGTC12.30519e-06
AAGAGTTTTGCGTCGACAACACACTCTAACTCGGTCGCAT12.30519e-06
AAGAGTTTTGGTGGGGCTGGCGTCACACGCACGTGTCTCG12.30519e-06
AAGATAAATCTGTAGAGGGATGTGCGTGGGGATGTCGTCT12.30519e-06

Read fractions use all reads in this source file as the denominator.