P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGATAACTGCGTGGGCGTGGGTACAAGAGTAGGGCAGGT12.30519e-06
AAGATAATATGATCACGCATCTATGTGGGTGCCACTTATT12.30519e-06
AAGATACAAGTGTAGCGTCACGAGGCTGTGCGTGGATTCC12.30519e-06
AAGATACACTAAGGAGTGGGGGTGCGTGGACGCCGCGGGA24.61038e-06
AAGATACATTGGTGGGAACGTACCCACGGGTGGGCGGTCG12.30519e-06
AAGATACCGTGGGAAAACGGGTGTGGATTGCATTTCACTT12.30519e-06
AAGATACGCGGTAACAGTGGCACGCGTGGGTGCGTCGATG12.30519e-06
AAGATACGCGTGACGTGGGTTAGGTTTGGACTATGTGGTG12.30519e-06
AAGATACGCTGGAATCGTGGAGCTTCGTGGATGGGGCGTC12.30519e-06
AAGATAGAGCGTGGGTGCCGTGAAGCGTCAGAGGTGGACC12.30519e-06
AAGATAGATCCCTAACTTCGTGGGGTCGTGGGGACTCTAC12.30519e-06
AAGATAGCGTGGATGTGGCGTGTATAAACGGTTCCGTGGG12.30519e-06
AAGATAGGCGCGCGTGGCGCGCATTGCGTGGGTCAGTGCT12.30519e-06
AAGATAGTCACGCGTGATTTTGCTGAGAGTGGCCTAGCAT12.30519e-06
AAGATAGTCGCGTGTCAACACTGCGCCCACGCGTGTGACA24.61038e-06
AAGATAGTCGTGGGATTGAGTTAGGAAGTCATTTCCCACG12.30519e-06
AAGATAGTGGACCATAATTAGCGTTTATATGATACACGCG12.30519e-06
AAGATAGTTCGCCATGGTCCCTTACTGTGGGGTGCGAGGA12.30519e-06
AAGATATACGTCGTGGATTACGTGGTAGGCGACGGTTGAT12.30519e-06
AAGATATAGTTTGGGCAGGGCCACGCGACGTGGGAGGGCG12.30519e-06
AAGATATATCTAGTAGACATGGTGTGGGAGTGGCGTGGGT12.30519e-06
AAGATATCCACGCGGTAGGTGGATGCGTGGGGTTGGTGGT12.30519e-06
AAGATATCTAGGCTCGTGGGTCACGTCACGCGTGGGTGTA12.30519e-06
AAGATATGTGTCGTGGGTGTGTGCCCACGGGAAGCTGGCC12.30519e-06
AAGATATTGGGAAGGAGGGGATGGGGAAGCTGTGACGTGT12.30519e-06

Read fractions use all reads in this source file as the denominator.