P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGATCACCCACGTTGTAGGTAGGCCGTGAGGCTAAAGCG12.30519e-06
AAGATCACCTCGTGGCGTGAAAAAGCGTGGACTCGTAATA12.30519e-06
AAGATCACGCAGGGTGGAAACGGCTTTGGTTGGTGCGCGA12.30519e-06
AAGATCACGCCTTGTGGGGTCGAACGTGGGCTTCACGTGG12.30519e-06
AAGATCACGCGTGGGCGTCCAAATCCGCGTGTAGTAAAAA12.30519e-06
AAGATCACGTGAGTCTCGGTGGGGTTCGCGTGGGGAAATC12.30519e-06
AAGATCAGTGGGGATACCCGGGGGTCGGCGTGTCTATTTG12.30519e-06
AAGATCATCCACGTCTCGGTCCGTGATATACGCGGCTGTG12.30519e-06
AAGATCCACATCCACGGGATAGAACGCGTGGGAGCCACGA12.30519e-06
AAGATCCACGAGCGTAACAGGACTAGCACTTAGCCCGAAA12.30519e-06
AAGATCCACGCAAGTAGTGCCGGTCGGCCGTGTCACTGAG12.30519e-06
AAGATCCACGCAGATGCGTTGGCTGATAGTAGGGTATCGT12.30519e-06
AAGATCCACGGGATGTGTCCACGGCGGAGCGGAGAGGCAC12.30519e-06
AAGATCCACGGTCTAGGCTCAGGAAAAGTTACCGGTGACA12.30519e-06
AAGATCCACTGGACGTGCCGTAGTGCGTGGGTACAGTGGA12.30519e-06
AAGATCCAGTGTAACGGTGCATAACGTGGGTAGAGCGGCG12.30519e-06
AAGATCCATAATCCCACGCATGAGTGGGCGTGCCACGATT12.30519e-06
AAGATCGAAGACATAGTCGACGGTACGTGACTCTGTTTGA12.30519e-06
AAGATCGAATGTGGATGTGCGTGGGAGCGTGGAAATGCCC12.30519e-06
AAGATCGACGAAGGTCACGCGTGGGCGGTGTTATGTAACG12.30519e-06
AAGATCGAGGGCGTGGTTACACGCGTGGGGATCAATTGTT12.30519e-06
AAGATCGATTATTTTATCACGCGTGGACGCCATGTGAAGC12.30519e-06
AAGATCGCGGTCGTCGCGTGACTAGATGATCGTGGGAGAA12.30519e-06
AAGATCGCTTGTCGTGGGGTCGCATGGCTATGTGTACGGG12.30519e-06
AAGATCGTCGTGGGTAATGGTGTTGAGGGTGCGTGGCCTG12.30519e-06

Read fractions use all reads in this source file as the denominator.