P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGATGGTGTTGATTCCACACTCGCGTGGGACAGAACCCG12.30519e-06
AAGATGGTTGATCTTGTAGCACGTTGGGAGATCACGTGTA12.30519e-06
AAGATGTAGTCCGCTTGGGCGTTCTGCAAGTCGTGGGCCC12.30519e-06
AAGATGTCCATATGTCAGTTGGACATAGGTTCCGTGGGTA12.30519e-06
AAGATGTCGACACGGTAGTGGGTTCGTGGGTATCGTCACG12.30519e-06
AAGATGTCGCGTGACGGGGGAAGAGTTGCATGGGCGTGGC12.30519e-06
AAGATGTGACGTGGGAAACGTCTATACGACAGAGCGTGGA12.30519e-06
AAGATGTGATAGTGAAAATGCGTGGGCGTCGTGGGGTTAG12.30519e-06
AAGATGTGCATTCGTGGTCACGAAGATAGGTTTGCGTGGC12.30519e-06
AAGATGTGGAATTGCGAGGCTAAGCGTGCTTCCAGCGTGT12.30519e-06
AAGATGTGTGCGTGAGTGGAGTGCGATCACAGCGTGGGTT12.30519e-06
AAGATGTGTGGGGTGGGGGGGCCATGACACGTGGTGGACG12.30519e-06
AAGATGTTGGATCGCTGCCTCGAGCGTGGGTGCACGGCGC12.30519e-06
AAGATGTTGTGGGCTGGGTGGATATCTAGGTGCGTGGATG12.30519e-06
AAGATGTTTACACGACGGCCCACGCACGTGTCGTGGCTTG12.30519e-06
AAGATTAGGTCGTGGGTGAGTGGCGATACTTACTTAGTCT12.30519e-06
AAGATTAGTGGAGTGGCACGTCGTTTATAGCCGTGGGACG12.30519e-06
AAGATTCACGCGTGTCACGTCGTCCAGAGTGGCGTGATGG12.30519e-06
AAGATTCACGCGTGTCGATTACCACGAGGCCTCGTGGGTC12.30519e-06
AAGATTCACGTGACGTACGATGAGGGGGGCGCGTGGGGCG12.30519e-06
AAGATTCCACGGGTGATATAGCTAAGGTCAGGCGTGGACG12.30519e-06
AAGATTCCACTCGTGGATAGCCCGTAGCTAACATGCCCCT12.30519e-06
AAGATTCCGTAATGGAGTACAGTTTTTACCCACGTAAGTG12.30519e-06
AAGATTCCGTGGACAATTCTGCGTGGCCGTGGGTAGACCC12.30519e-06
AAGATTCGCACACTGTTCCACGCACGGGGTCAGGAGTTGA12.30519e-06

Read fractions use all reads in this source file as the denominator.