P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGATTCGCGAGCGTGGATTGCGTGGCCATGGTGAACGTG12.30519e-06
AAGATTCGCGTGGACGTGGCAAAGTACCGATAGAAGTGGG24.61038e-06
AAGATTCGGGTGGATCGACTGTTATCCGGTATGTGGGACT12.30519e-06
AAGATTCTCGCGTGGGGCGATAGGCACACTAGTGGACCAG12.30519e-06
AAGATTGAATGGAGGTGTGGACGTGCATTATTAGAACATC12.30519e-06
AAGATTGAGTTAACGTGCCATGCGTGGGACGCATCGTGGA12.30519e-06
AAGATTGCGCGATCTGGTGCCTCGTGGGGTGCCCACGATC12.30519e-06
AAGATTGCGCTGATGCGTGGATTTCACTCAGTCCTTGCAT12.30519e-06
AAGATTGCGTGTTATATTGGATGCGTGGGGGGGTGGTTGA12.30519e-06
AAGATTGCTGCGTGGCAGTGGCCGTGGTAGTGGGGGGCCA12.30519e-06
AAGATTGGGTGACGCGTTTGCGTGGGCTCGCATTCCCCCG12.30519e-06
AAGATTGGTATTATAGGTGTGCGTGAGTGTGGATGACATC12.30519e-06
AAGATTGGTGTGGAGATGTCAAGCGTGCGGTGGCTCTTTG24.61038e-06
AAGATTGTCTGGCACGCCCCACGCGCGAAGAACCGTGTGT12.30519e-06
AAGATTGTGAGTTCGTGGGTTCGACCTCGTGGATGGTTCG12.30519e-06
AAGATTGTTATGCCGAGGTCTACGTGTATTTTCACGGCTT12.30519e-06
AAGATTTAGACGTTCGCTGCGTGAGTGGCACGCGTGGGTT12.30519e-06
AAGATTTAGGACTTGCGACGTGGCGCCGTTGTGCGCGTGA12.30519e-06
AAGATTTAGTGTCTGTGCGTGGGTGGGTGGAGTGAGTGGA12.30519e-06
AAGATTTATAAGCTGACGTGTGGCGTGACCTGCGTGTTCT12.30519e-06
AAGATTTCGGCGTGGAACACCGTCCGGCGTGAGGTCCGAT12.30519e-06
AAGATTTGCCTGTTGCGTCACGCGCGTGGTGATACGTGGG12.30519e-06
AAGATTTTATCTTGCGTGGAAAGCGTCGGCCCACTGAGTA12.30519e-06
AAGATTTTTGCGTTCCCACGAGTGTCGTGACATTATTACA12.30519e-06
AAGCAAAGGCAGACCACAGGGGGTCAGCGTGGGAGTGGGG12.30519e-06

Read fractions use all reads in this source file as the denominator.