P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGCGTACGTTGTGCGTGGGCTTCGCCTGTTATGTTCCCA12.30519e-06
AAGCGTACTCACGAATTGTGAGTGCGTGAACGTGGAATTC12.30519e-06
AAGCGTATCCCCACGTGATACCACTAGGGGCCACGGTAGG12.30519e-06
AAGCGTATCGCTAGTTCATGCGTGGGAGTGGGAGGACCGG12.30519e-06
AAGCGTATGGGCTGACGTGGTGGGACGGAACGGAAATGTC12.30519e-06
AAGCGTCACGCGACGTGCGTGAAAATCACCGTGGCCAAGA12.30519e-06
AAGCGTCAGTGGGTGCGGTGACGAGGTGCGCGTGGGTAGG12.30519e-06
AAGCGTCATGCGTGGGGCTTGTCTTCGTGGGACGCGATTT12.30519e-06
AAGCGTCCACGCGTGGGTGGGTCGGACGTGGAGTAGGCTA12.30519e-06
AAGCGTCCGAGGTCAACGTTTTGGTGGGGTGCCGCTTTGG12.30519e-06
AAGCGTCCGTGTGATGCGTGGAACGCGGGGATGAGTGGAT12.30519e-06
AAGCGTCTACCGGCTGTGCTCCCACGGGATGGTGGCCGTG12.30519e-06
AAGCGTCTCGTGGGTATGGTGGAATCGTGAGTGGATGCAC12.30519e-06
AAGCGTGAAAGTCGGGCGGCGTGGGAGTGGTACGCGGGGG12.30519e-06
AAGCGTGAAATGGGGGATGTTAGCAGAGACTCCTGGTGGG12.30519e-06
AAGCGTGAAGCGGTGAGCACTCGCGTGGATGTAGCGTGGA12.30519e-06
AAGCGTGAATTTAAAATCCACGCACTGTGCGGAGTGCACG12.30519e-06
AAGCGTGACCAGGGCGTCCAACGCGTGGACTATGGGTAAA12.30519e-06
AAGCGTGACGTGAATAGAATGCACCACGCGTGACTTGGGA12.30519e-06
AAGCGTGACGTGATTTTGTTAGCGGCAATTTGAACGTGGA12.30519e-06
AAGCGTGAGGATCCACGTTGCATTATGGGGTGCGTGGATG12.30519e-06
AAGCGTGAGGGTGGACGTTGCCCACACTAGTGGGTCCACG12.30519e-06
AAGCGTGATCAGGGTGGACGTGTGTTGCGTGGACGTGTTC12.30519e-06
AAGCGTGATCTACAGGTTGCATCCTACTTCCGGACGCCCA12.30519e-06
AAGCGTGATGGCGTGGGATTGCCGTGGAGGGAGCGTGGGA12.30519e-06

Read fractions use all reads in this source file as the denominator.