P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGCGTGATGTTAGGTCGCTCTTCTCGTGGGCTATGCTAG12.30519e-06
AAGCGTGATTCGCGCGTGATTTCAGGTTCCACGAAAGGGC12.30519e-06
AAGCGTGATTCTCGTGGGTGGGGTGATGTGGGTCGGTTTA12.30519e-06
AAGCGTGATTCTGCTGGCCTGGAGGGTGCCTCGTGGAATC12.30519e-06
AAGCGTGCCACGATACGTGGAACTTACGTGGAAGACAATG12.30519e-06
AAGCGTGCCCGGAGTGGATTGACGGCCCAAGGGGCATACG12.30519e-06
AAGCGTGCCGTGGAGAGATGACCACGCGTGGACGGGCATA12.30519e-06
AAGCGTGCCGTGGGCATCGTAATAGAGCGTGGGCGTAAGC12.30519e-06
AAGCGTGCGATAGAATGCGTGGGCGGCGGGCCACGGAGGC12.30519e-06
AAGCGTGCGTGGACGGGCGACACTCTGTGGAGTCTCTGGC12.30519e-06
AAGCGTGCGTGGGGGCGCGCCCAGCTTACACAATGAGTGC12.30519e-06
AAGCGTGCGTTGTTCGTGGACAGCACCCATGCCGTGGACC12.30519e-06
AAGCGTGGAACTATGGGGCGTGTGGGATATGCGCACAGGG12.30519e-06
AAGCGTGGAAGCCAGGGCGGGGTAGCGCGTGGATGTGGAG12.30519e-06
AAGCGTGGAAGGAACTGCGTGAGAGGTGGAATGCGTGGGA12.30519e-06
AAGCGTGGAATAATACTTAACGCGTGGAAGGTTCCGATTA12.30519e-06
AAGCGTGGAATACCTTTACCAGTTTGTCAGGGATTGCGAA12.30519e-06
AAGCGTGGAATTGGGAAGTCTCGGCGGAGCACGTGGGCAG12.30519e-06
AAGCGTGGACACTCGTTAACGTGGATAGCGTGCTAAGCTA12.30519e-06
AAGCGTGGACAGAGGTTCGTGACGTGGGACAGAATGGCTG12.30519e-06
AAGCGTGGACAGGGCGTGGAGAGGTCCACGGGTAGGCTAC12.30519e-06
AAGCGTGGACCAGCGGGTGATGGACCTCTTCCAGGGTCCA12.30519e-06
AAGCGTGGACTCGCGCGTTACTGTTTATAGTCCGATGTTC12.30519e-06
AAGCGTGGAGAAGGTGGACGTACGTGGGGTGGTCGGTGCC12.30519e-06
AAGCGTGGAGCCGCGGGTCAAGGTGCAGGTGGGTGTGGGC12.30519e-06

Read fractions use all reads in this source file as the denominator.