P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGGAGCAGCGTGGGCTTCGTGGGACAACGGTGTGCTGGT12.30519e-06
AAGGAGCATCACCGCGAGGTCGAGCGATCCACACCTTGTG12.30519e-06
AAGGAGCCCGTGAAACTAACTTCGCGTGGGAGCGTGGGTG12.30519e-06
AAGGAGCCGTGGGGGTCGTGGACGTTCGTGGTTAACGCAA12.30519e-06
AAGGAGCGAATGTGGTGGACTGCGTGGGGGAGATGCCATC12.30519e-06
AAGGAGCGGGGCATGCCCACGGGTGGCGTGTCGTGAAAGG12.30519e-06
AAGGAGCGTGGAAGCCAGTGGGCGAAAGTGGGAGGGGGGG12.30519e-06
AAGGAGCGTGGGATGAGTCGTTAGTGTCCACGAGAAGCCT12.30519e-06
AAGGAGCGTGGGGTCGTGGAAGTCGAGTAGGTAACGGGCT12.30519e-06
AAGGAGCGTGGGTAAGTGGAGGCGGCCACGCGACGTAAGA24.61038e-06
AAGGAGCGTGGGTTAGTTCCACGCGTGGCGTAGGCCCGTG12.30519e-06
AAGGAGCGTGGTGCAGGCAGTGGACGTCGTGGATCAGATT12.30519e-06
AAGGAGCGTGTCGCGTGGACGCGTGGAAAGGGTAGATGCA12.30519e-06
AAGGAGCTAAGGCTGTGCGCAGGTGTGGAGAATGTATTTA12.30519e-06
AAGGAGCTATTACGTGGATGTCCACGCCCTGCGTGCCGCC12.30519e-06
AAGGAGCTATTTGGTACGGAACCACGCGTGGGAAACAATT12.30519e-06
AAGGAGCTGTTGCGTGGACGTCTTTAATGCGTGAATCTAT12.30519e-06
AAGGAGGAATTGCGTCGAATTCGCGTGGTGGAGACGACAA12.30519e-06
AAGGAGGACAATGGGCGCGTGGGGCCGTGGGTCTGGCATG12.30519e-06
AAGGAGGAGCCCCACGAGTGGGCGAGTTAGGCTCATGATT12.30519e-06
AAGGAGGCAAACTGCAAAGGGCCAGGGTCACGGAGAGTCC12.30519e-06
AAGGAGGCACGGGCGAGGCAACGGCACGCGTGGGTTTGCG12.30519e-06
AAGGAGGCCACGTATCGCACGTGGGATGTGTGGGCGTGCT12.30519e-06
AAGGAGGCCTTTAGTCCGTGGGAATGGCGGTATGAGGAAC12.30519e-06
AAGGAGGCGCGGTGTGGATTTGTGTACGAGGGCGTGGGTG12.30519e-06

Read fractions use all reads in this source file as the denominator.