P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGGAGGCGGCAGCGTGCAAGCCAGGTGACTCCGTGGAGA12.30519e-06
AAGGAGGGCGAAAAGGCCACGCACGTGGACAGCAGCCGGT12.30519e-06
AAGGAGGGCTTAGTAAGGGGTTCCCCACGCGTGGAAGTGA12.30519e-06
AAGGAGGGGTGGGAAATCGCGTGGGTATCGTTGAATATGG12.30519e-06
AAGGAGGTACGTGGGTGTGTAGAATATGCTGCTCACTTTT12.30519e-06
AAGGAGGTTTGACGTACGCCTGTGGTGCTTGAGGTGGAGA12.30519e-06
AAGGAGTAAATTATGGGTGGGTTGCAGTGGGCATGTGGCG12.30519e-06
AAGGAGTAAGTTGAAAGCACGCGTGGGGCTGCGAGTTGTT12.30519e-06
AAGGAGTACACGCAGCTCGTGGATGTGGGTATGGATAACG12.30519e-06
AAGGAGTACGGATCTCACGTGGGTAATGCAGTTAGAGTGG12.30519e-06
AAGGAGTATTCGTGGGGTATTGCACGGTGTGGACCGCGCG12.30519e-06
AAGGAGTCCACGCTTGTGTTGTGGGTACCCACGAGGAACA12.30519e-06
AAGGAGTCCTCGGGGAATCACGCGTGATTATTCAGTTTCG12.30519e-06
AAGGAGTCGTAGCGTGGGTGGCGCGGGCGCGGTGGGGCAC12.30519e-06
AAGGAGTCGTCATCGTGGACTGCGTTACTAGGACGCGTGA12.30519e-06
AAGGAGTGAGACACGGTGGAGTGGCAGTGTGACCGTGGTT12.30519e-06
AAGGAGTGATCTCGCGTGGAAAGTTGGATGTGCCGATCCA12.30519e-06
AAGGAGTGCAAGTGTTCAGTGCGGTAATGCGTGGGAGTGG12.30519e-06
AAGGAGTGCGTGGAAGTCTAAGAGCGTGAGGCAGCCCATC12.30519e-06
AAGGAGTGCGTGGGGTCGGGTGGACGGGCTACACGTGTCG12.30519e-06
AAGGAGTGGAGCTCGGTCGACGTGGGTGCGTGGGGCATGA12.30519e-06
AAGGAGTGGATATGGGTGGGATCTGCGTGGGACAGAACAA12.30519e-06
AAGGAGTGGATTGTGCCAGCGTGGGTTTCTTTCGATAGGA12.30519e-06
AAGGAGTGGCCGCTCGATCGACTGTGGAACTATTCCCACG12.30519e-06
AAGGAGTGGCTGTCACTTGCCGGCAAGACGTGGGGAGAAA12.30519e-06

Read fractions use all reads in this source file as the denominator.