P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGGATGATATTCCACGGGAGGTCCCACTGGCGTCGTGGA12.30519e-06
AAGGATGATCCACGCGTGATCCTCACTTCACGTGTGCCCG12.30519e-06
AAGGATGCACGCTCCACGGTCAGCTTAGCCGTGACGACAT12.30519e-06
AAGGATGCACTTCGCGTGGGGTCGTGTGAAGTTGTCGTGT12.30519e-06
AAGGATGCGCGTGACGTGGGTCGGTCCGGGTGGGTGGTCA12.30519e-06
AAGGATGCGTGGGGCCTGTTGCTGAGATGTCCCTCGTGGT12.30519e-06
AAGGATGGAAGTGGATCAGGGGGACGCCGTGGACGCCCCA12.30519e-06
AAGGATGGGCAGCGGCGTGTGGGCCCACGAACTAACGTGT12.30519e-06
AAGGATGGGCTCTCGTACACTCAGGGCCCACACGAGTGGA12.30519e-06
AAGGATGGGGATAAATGGTATGTCCCGTGGGAGTGGAAAG12.30519e-06
AAGGATGGGGCACACGCCGTGTCACGCGTGGCAGGAGTCG12.30519e-06
AAGGATGGGGGGGCCGAAGCGGTTCACGTCACGCGTGTAT12.30519e-06
AAGGATGTACACGTTCGTGCGTGGGAACCTGGGCGTGCGA12.30519e-06
AAGGATGTCACGCGGTCTATCGTGGGTCGCTCGTGGTCAT12.30519e-06
AAGGATGTCTTCTCACGCGCGGGTCTCGTGGGATGATAGT12.30519e-06
AAGGATGTGCCGTGATCGTGGATTTCTCGCTGGGGTAGGA12.30519e-06
AAGGATGTGGGGTAGTTGCCGTGGGGCACGGAACGGGCCA12.30519e-06
AAGGATGTTCACAGTGCTATGTCCTTTGCGTGGACTCGTG12.30519e-06
AAGGATGTTTGCACCGATGGACAAGAGGCCGCGATGTGTC12.30519e-06
AAGGATGTTTTCATGATCGCTGAGTGGGCTGGCCGCGTGG12.30519e-06
AAGGATTACACACGTGGAGAGTTGCTGCGTGTCGTACACG12.30519e-06
AAGGATTACGTGACCGTCAAACTAGTACGGTCATGCGTGA24.61038e-06
AAGGATTCGGGGGAATGCAGTGGATTAGCGCGAGATGTTC12.30519e-06
AAGGATTCGTGTCGTTAGGCGTGGGAAGGTGTAGAGTGGA12.30519e-06
AAGGATTGCGTGGATTAAGCGTGTAACACTCCGGGGATGG12.30519e-06

Read fractions use all reads in this source file as the denominator.