P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGGATTGCGTGGGCTCATCGTTGTCGTGGAGACGGGATT12.30519e-06
AAGGATTGGTTCGCAGCGCGTGGAAGTAGGTGGCGGGCCG12.30519e-06
AAGGATTTCACGTGCGTCGTGACTAGGTCAGCTGTGACGA12.30519e-06
AAGGATTTCCACTGGCCTCGTGGTACGTGGGCAGGGGCAT12.30519e-06
AAGGATTTTGTGTGTGGGCTCGCCTTTAAGTGTACACTAA12.30519e-06
AAGGATTTTTCCACGTGAGTTCCACGAAGCCACACTTTAG12.30519e-06
AAGGCAAAGTTTCAGTGCGTGGGTGGTAGGTGCGTGAAAT12.30519e-06
AAGGCAACCAGTGGAAAAGGTTGGTTGAGTGGGGGGGTTC12.30519e-06
AAGGCAACCCACGCAAGCTGTTATCCGGTGGAACCTGGAT12.30519e-06
AAGGCAACTTATGTCAGTGGCAATGCGTGGATCGACGAGA12.30519e-06
AAGGCAAGGTGAGGTCCACGGGATGGGGGAACACGCGTGT12.30519e-06
AAGGCAATACGCCGTGATGGTCCGTGAGTGGAAGTGGCGA12.30519e-06
AAGGCACACGGGTGTCCCACGGTGGTGAGGAGCTGCGTGG12.30519e-06
AAGGCACACTCACGCGATTGGGGAGCGTGGCGTGTTTTTT12.30519e-06
AAGGCACCCTGGTGAAGCATGGCGTCAGGTCGGTTCTTAT12.30519e-06
AAGGCACGGTCGGTGTCCCCTCGGGGATAAGTGCGTGGTG12.30519e-06
AAGGCACGTCACGGACTGTGTAATGGGTGGGCGGTCTGTA12.30519e-06
AAGGCACGTGCCGCGTGGGTCTGACTGAGGGTAAGAGTCT12.30519e-06
AAGGCACGTGGGTGGAGTCCCCACAATTGTGAGTGGGGCA12.30519e-06
AAGGCAGACAGGAAGCCCTTTTTGGACTCACGCGTGGACA12.30519e-06
AAGGCAGCACGTGATATACCCACGAAGTGCGTGAGAGAAT12.30519e-06
AAGGCAGTGCAGAGTGGGGGATCTTGTAAATGGCGTGGGT12.30519e-06
AAGGCAGTGGGTGCGTGGGGTGTGGAAAGTCAGAGGGTTG12.30519e-06
AAGGCAGTGTGTGGGTGGCGGACCCGTGCGTGGATTGGGG12.30519e-06
AAGGCATACAGCACGTGGGCCTAGGTGGATTGGGGCGTGG12.30519e-06

Read fractions use all reads in this source file as the denominator.