P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGGCCCACGGAATTGGCATTCCCGAGGAACGGGCTGGAC12.30519e-06
AAGGCCCATCACGGGCGATTGTTGGTGTCGTGGGTTCTAC12.30519e-06
AAGGCCCCGGGGTTTGCGTGGCGCCGTGTAATGCAGGCCA12.30519e-06
AAGGCCCCGTCGTGGGAGCGCGTGGATGTGTCCACTCGAC12.30519e-06
AAGGCCCCTCTACTTGGCCCGGGTGTACGAACGGCACACG12.30519e-06
AAGGCCCGGTGGAAGACGCGTGGGGTGTGGTTCAGTGTGA12.30519e-06
AAGGCCCGTGTGGCGTTGCGTGGGGTGTCGGGTGTACGGT12.30519e-06
AAGGCCCTCCTGCCCGTGATACAGCCAACCCACGCATGCG12.30519e-06
AAGGCCCTGCGAAGATGGTATTGTGTCCGTGGAATGGTTA12.30519e-06
AAGGCCGAACCGCGTGACGTGGTTCCGGATTCCACGCGAA12.30519e-06
AAGGCCGAGTGGATTCAGCCTCGCGAGACCGCGTGGAACG12.30519e-06
AAGGCCGCCCTGGTAGCGAGCTGCAAAAGTCTGATGAGAC24.61038e-06
AAGGCCGCGGTGAGTGCGTGGCGTGGGGTCCGTATAGCGG12.30519e-06
AAGGCCGCTGGTGGGTGCCGTGGGGTCGGGATCTACTAAT12.30519e-06
AAGGCCGGCAATAGTTAGTGGACTGGCGATGGCCGCGTGG12.30519e-06
AAGGCCGGCGTGGCCTCCGTGGAACGCACGCGGGAGTGGA12.30519e-06
AAGGCCGTATTGCTATGTGTTGTCCACGAGTGGGTGAGAC12.30519e-06
AAGGCCGTCCACGGGGAGTCTCTGTGGTGGGCAAAAGATT12.30519e-06
AAGGCCGTGGATGGATGGGTAAGGGCGTGGGGCAAGGGCA12.30519e-06
AAGGCCGTGGGCAACGGTGCAGTCGATCTGCACAGAATAT12.30519e-06
AAGGCCGTGGGGGAGGCGTGGAACGCGGGCGTCCACGGGG12.30519e-06
AAGGCCTATTCCACGCATCCGTGAATATGTTTGACACTAC12.30519e-06
AAGGCCTCTTCGAACTCTTGGCATCCACGAGTGGGCTTGC12.30519e-06
AAGGCCTGAGCACGAGTGGAACGTGCGCGTGTGGTTGTCC12.30519e-06
AAGGCCTGAGCCCCACGGTTACTAGAAGGCGTGGGGGGTC12.30519e-06

Read fractions use all reads in this source file as the denominator.