P PanApta
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Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8016772

BEND3-d4_CC40NCGTTTTYWCA3

Reads
433,804
Distinct strings in file
425,592
File size
5.1 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB49150
Archive record:
ERR8016772
Sample:
SAMEA12312957
SHA-256
b925e91c67bf7f501c6b0dddabbbdab48c2547869b36db78668b4815c28236b7

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGGCATACATATATCAAGACGTGGTGTAACGCGTGGGGG12.30519e-06
AAGGCATACCTGATTGGTCGGTTGCGTGGGTTGCGTGAGG12.30519e-06
AAGGCATCTGTGGGTCAGGGCCGCGTGGGGCGTGAGTGGG12.30519e-06
AAGGCATGCGGTCAGATGTGCGTGGGCGAGGAGCCGCTCT12.30519e-06
AAGGCATGGAAGGGTCGGCCTGGATTGCGTGGGTGATGTG12.30519e-06
AAGGCATTAGGTGTGACGTGTCGAGTGGGAAGTGTGTAAT12.30519e-06
AAGGCATTGGCCTCTGTGGGGCCCCGCGTGGGCTACTAAC12.30519e-06
AAGGCATTGGCTCTGAGTGTGGAACTAATGCGTGGATTTT12.30519e-06
AAGGCATTGTGCGCGTGGTTGTGGATTGCTGGTGTGGCCC12.30519e-06
AAGGCATTTAGTTGAACGTCGGCGTGGGTACGGGGAGTCA12.30519e-06
AAGGCATTTTTTCCACGGGAGCGATTGGCAGTGGAATTTA12.30519e-06
AAGGCCACCCGGTGGATCGCCATCCGTGGGCAGAGTAGCT12.30519e-06
AAGGCCACGAGGGGCATGAACTTCACGTCACGGGTGGGGT12.30519e-06
AAGGCCACGCGGTACGTAGGTAGGGCAAAAGAGTGGGTGC12.30519e-06
AAGGCCACGCGTGACTAGTCCCCACGGAGTGACTGTTCGC12.30519e-06
AAGGCCACGCGTGCAGAATGGACATGAGTGAAGTCGTGAG12.30519e-06
AAGGCCACGGAGTGAGGTGGGGTGGGTGGAGGTGTGGGCC12.30519e-06
AAGGCCAGAACTAGCGTAGGTGTGGGGCCCACGCGTGGCG12.30519e-06
AAGGCCAGAGAGAGTCACGCAGGCTGGTGCGTGGGGCGTA12.30519e-06
AAGGCCAGCTCCGTGGATTCGGTGTGGAGTCCCTGCTATA12.30519e-06
AAGGCCAGGTATTGTACGTCACGGCGCGACTGCGTGGGAA12.30519e-06
AAGGCCAGGTTCGCTCTTACCTTGTGGGTCCGTGGGTCAT12.30519e-06
AAGGCCATCCATACGGGCCACGCAACGTGGAATAGCGGAG12.30519e-06
AAGGCCATGGACGTTGTGGTGGGCATCGTGGGAGTTGCGC12.30519e-06
AAGGCCCACGCGTGGTACAAGGTCTCGGTCAGGTCTGAGC12.30519e-06

Read fractions use all reads in this source file as the denominator.