These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAAAATGGAGCCGTACTCGGAAAGTAATCCAGTATAAC | 1 | 4.68367e-06 |
| AAAAAACACGGGTGAGGGCGCGTGGAGAGCGGGGACATGA | 1 | 4.68367e-06 |
| AAAAAAGCTACGGGCCACCTTGCTGCGTTCGTGTGCGTGA | 1 | 4.68367e-06 |
| AAAAAAGTTGGTGCCTCTGTAACTCATTGATTAATCGTAT | 1 | 4.68367e-06 |
| AAAAAATGGTGTCGCGATGCGTTGCGTGGATGTTACTACA | 2 | 9.36733e-06 |
| AAAAACACAGGGTGCGTCGCGTGGGAGATATCTATTGTTT | 1 | 4.68367e-06 |
| AAAAACACGGGCGATTCCGTCCCACAGCGGCCGTGATGCT | 1 | 4.68367e-06 |
| AAAAACCCCTGTTCTCGGAGAGGATGTGAGCGGCGTGGGT | 1 | 4.68367e-06 |
| AAAAACCGTGGGTCTTAATTTTCGGTGATTGTCCTTTACT | 2 | 9.36733e-06 |
| AAAAACCGTTGAAACCGATAGCAGGGGGGCTCCGGTTTTG | 1 | 4.68367e-06 |
| AAAAACCTCGTAGTCACGCGTGGGTAGGAGGTCGTTCCGG | 1 | 4.68367e-06 |
| AAAAACGACGTGAAAATGGCTCGGTAAGTGGGAGGGGTGA | 1 | 4.68367e-06 |
| AAAAACGCCCACTTGTGGCGGTTACGTGGATTCCGTGTAA | 1 | 4.68367e-06 |
| AAAAACGCGTCCCACTTATTAAAGTACTTATCGCGTGGTG | 1 | 4.68367e-06 |
| AAAAACTCACCAGCCCCACTGATGGGGTGGGAATTGTGGC | 1 | 4.68367e-06 |
| AAAAACTTCGTGGGGTCGTCTTTGCCGTGCAATACGGGCT | 1 | 4.68367e-06 |
| AAAAAGACAAGGGGTGTGTGCGCATTTTCACGAGTGTCAT | 1 | 4.68367e-06 |
| AAAAAGACGTGGACGGGTCGGCGCTGGGCGTCAGTCTTTC | 1 | 4.68367e-06 |
| AAAAAGAGAGTTGCACGCGCCGCGTGGCCGTGGTGGAAGG | 1 | 4.68367e-06 |
| AAAAAGATATTTCGGAGTGGGCTCCGTGTAGTTACGTGTG | 1 | 4.68367e-06 |
| AAAAAGATCGACAGACTAGCAACCTGGCTGTTCACGTATT | 1 | 4.68367e-06 |
| AAAAAGCGTGGAGGCGTGAGGGCTAAGGGCGCGACCGTGT | 1 | 4.68367e-06 |
| AAAAAGCGTGTTGTGAAGTCGAAATGGGGACCGTGAAACG | 1 | 4.68367e-06 |
| AAAAAGCTTACGCCGTGGACGATCCCGCGTGGAGGTATAG | 1 | 4.68367e-06 |
| AAAAAGGAAGGCAGTACCTTGGAGCCCTGTAATGCGTGGA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.