These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAAGGCACGCGTGATCGGGTGTGTGGATTGGAGCTGCC | 1 | 4.68367e-06 |
| AAAAAGGCCAACCTGTTGCGGGTGGCTCTGCAAATTCGGC | 1 | 4.68367e-06 |
| AAAAAGGCGCGCACGGCCTTGGTAAAGCACGGAGGGTAAT | 1 | 4.68367e-06 |
| AAAAAGGTGTGTGACGAGGTAGTGGGTAGGTGGGGGAAAT | 1 | 4.68367e-06 |
| AAAAAGTAGGGCGGTTGGATGTGCACTTCCCGGTAGCTCT | 1 | 4.68367e-06 |
| AAAAAGTTGTGCGGCGATAGTGCACGGCTTGCGTGGTGAG | 1 | 4.68367e-06 |
| AAAAAGTTTAGAGCTCATCACAAGGCGTGTATGCTCTGTG | 1 | 4.68367e-06 |
| AAAAATATGCACGAGGGTACGTCGCAACTCTGGAACTTCA | 1 | 4.68367e-06 |
| AAAAATCCACGTGCTAGTTAGTCTAAACGCGAGCAGGTGC | 2 | 9.36733e-06 |
| AAAAATCCGCGTGTTCTAACCTGTTGTAGTGGTCTGTGGT | 1 | 4.68367e-06 |
| AAAAATCCTTCGTGGACAGAGGTCGTACACGGTACTGGCA | 1 | 4.68367e-06 |
| AAAAATCGTGGAACTCTGATATCGCCGTTGGCTCACACGT | 1 | 4.68367e-06 |
| AAAAATGTTTCCGTGCGTGGAGCGCGATTCGGGAGCTTCG | 1 | 4.68367e-06 |
| AAAAATTGCCCACGGATCGATGACGTGTAGTCTTGAAAGT | 1 | 4.68367e-06 |
| AAAAATTGCGTCATTGCGCGCCGCGTGTGCAGGCGAGGGC | 1 | 4.68367e-06 |
| AAAAATTGGGGGAGTGTGGATCGGTGCTGAGTGGCCTGCT | 1 | 4.68367e-06 |
| AAAAATTGTGGTCTCGTGGGACGGAGTCTGGGTGGAGGGG | 1 | 4.68367e-06 |
| AAAAATTGTTGGTGGACCCGGAGGGTGGAGAACCGGGCTA | 1 | 4.68367e-06 |
| AAAAATTTTGGCACAGCGAGGTTGGGCGTCGTTGTGTGGG | 1 | 4.68367e-06 |
| AAAACAAGGGTTAGGAGAAATCACGTGGCCCACGGGAGGG | 1 | 4.68367e-06 |
| AAAACACCTGAAGTCGAGTGGGAGAGGTGCGTAGTGGGGT | 1 | 4.68367e-06 |
| AAAACACGAGCTAGAAAGCTCTACCAATGAGTGGAAAGTG | 1 | 4.68367e-06 |
| AAAACACGAGGGCTGTTGATAACCGAGTGTGGATACTGGC | 1 | 4.68367e-06 |
| AAAACACGCGAGGAAAATAACAAGGCGACGCGCGCGATTC | 1 | 4.68367e-06 |
| AAAACACGCGCGTGAAATATGTTTAGGCGGTTCGGGGCGG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.