These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAATTGTCACGACCTGGTTCGTGAGGTCTATCGTTGTGCG | 1 | 4.68367e-06 |
| AAATTGTCACGGATACGCCCACTAAGATATGGGGGCGTGG | 1 | 4.68367e-06 |
| AAATTGTCCGCACCCTGCCCATCTTGGAGGTGGTTCGTGA | 1 | 4.68367e-06 |
| AAATTGTCCTTGACGAGGGGCCCCACGTTAAGTGCACGCG | 1 | 4.68367e-06 |
| AAATTGTGCCGCGTGGGCGGACGGAGTGGGAGGACCGTGT | 1 | 4.68367e-06 |
| AAATTTACACGGTGAGTCACGTGCCACGCGTGGATGGTGT | 1 | 4.68367e-06 |
| AAATTTATGGTGGGGCACTGCGTCATCGTGGCAGTTGGTT | 1 | 4.68367e-06 |
| AAATTTATGTAGTCAGCGTAGTGATGGTGTGCGTGGGCGC | 1 | 4.68367e-06 |
| AAATTTCAGTGGATGGCGTGCTTTGGCGTGGCGAAGCAGG | 1 | 4.68367e-06 |
| AAATTTCCAGAAGTAGCCCTAACAGCCCGAGCATCCCTTC | 1 | 4.68367e-06 |
| AAATTTCCCCGGTAGGTTCACACGCGTGACGTGGGACCCG | 2 | 9.36733e-06 |
| AAATTTCCCGTTCGTGGGGAAAAGGCTAGGTCGCGTCGGA | 1 | 4.68367e-06 |
| AAATTTCGTGAAGAGTGGAATCCAAGCTTCCGTCGGGCTT | 1 | 4.68367e-06 |
| AAATTTGCGTGGGGATGGTGGGTTTGTGTTAACCCACCGG | 1 | 4.68367e-06 |
| AAATTTGCTGGCATGGTACGTACATTCCCTATGCGTTTGA | 1 | 4.68367e-06 |
| AAATTTGCTTGAAGATAGTCACGAGGCGCAGTCAGGTGAA | 1 | 4.68367e-06 |
| AAATTTGGACATATCGTGGGTCGTGGGAGTGGGGGTTCGG | 1 | 4.68367e-06 |
| AAATTTGTTCCCTGAGTATCACGTGCGTGGGGGCTAGTAA | 1 | 4.68367e-06 |
| AAATTTTACTCACTATCAGTGTGATCTTTCGATATGTTCG | 1 | 4.68367e-06 |
| AAATTTTTTAGGGACAAGGTCGTGGATATTCGTGGCAAAG | 1 | 4.68367e-06 |
| AACAAAACGAGTGGGCTTTTCCACAGCGAGTCAGGGGGAC | 1 | 4.68367e-06 |
| AACAAAAGTTCTTCAATTTGAGCATCCGCTTGGGTATCCA | 1 | 4.68367e-06 |
| AACAAAGACTGTAGGAGCGTGGGGCATCGAGGCCGTGGTG | 1 | 4.68367e-06 |
| AACAAAGCGAAAGATAAGCAAGTTGCGGGGCCCAGCACGG | 1 | 4.68367e-06 |
| AACAAAGTAAGTGGCTCAGTTCGCCAGTGGGAGTGCGTGA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.