These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACAAATACCACGCAAGTTGTATGTCGCTGGTATCTTCCA | 1 | 4.68367e-06 |
| AACAAATTTCCACAGTCGCGTGGGTGTGATGAATCCGCCT | 1 | 4.68367e-06 |
| AACAACACGGTAGCAGGAGATCTCACGCTTGTGCGGTGCT | 1 | 4.68367e-06 |
| AACAACAGACACGGTGCGTGGATGCTCAGTGGAACGTAGC | 1 | 4.68367e-06 |
| AACAACATCGAGGGTGTGGACCAGCGTGTCGGAGCTGACC | 1 | 4.68367e-06 |
| AACAACATCGTGGGTGAGTTGCTGAGCGTAAGTGTGGGTG | 1 | 4.68367e-06 |
| AACAACATGTGCGTGGATGTGTCAGTTCAGGGAGTGATGT | 1 | 4.68367e-06 |
| AACAACATTGTGGTACGGCAGGAGGACGGAAGGGGCATGC | 1 | 4.68367e-06 |
| AACAACGATGTCAGAGCGTGGACTGTAGTAGCCGATCCCA | 1 | 4.68367e-06 |
| AACAACGATTTCTATTGCACTTTTTCCCTGCGTGGGTTTG | 1 | 4.68367e-06 |
| AACAACGGAAGTCGGAAGCACGGGCCACCTGGCAGTCGTG | 1 | 4.68367e-06 |
| AACAACGTGGTTGTGGATCGTTGGGGCCCGTCGACGTGGG | 1 | 4.68367e-06 |
| AACAACTAGGATGAGAGGCGTATTAACGCGGGCGGATGGC | 1 | 4.68367e-06 |
| AACAACTGAGACCCCATGGAGATGGTGAATTGCGTGACGC | 1 | 4.68367e-06 |
| AACAAGAGGGGGTCCGAAGTCCAAGGACGATGCGACGTCG | 1 | 4.68367e-06 |
| AACAAGCAACGCGGTCGTGGGGGGTTGTTCATGTAAGCCC | 1 | 4.68367e-06 |
| AACAAGCATGGGAGGTTAAGTAGTGGGGGCTTCGCTAGAC | 1 | 4.68367e-06 |
| AACAAGCGATACGTGTCCATCGATTACGTGGGTGGGTGGC | 1 | 4.68367e-06 |
| AACAAGGAGTAAGCACTTTGCCACGGCTAGACTGAGGGTA | 1 | 4.68367e-06 |
| AACAAGGCAAGGCCGTGGATTCAGGCACTGGGAGCTACAT | 1 | 4.68367e-06 |
| AACAAGGGGCGGGAGAGGTTCGGTGGGCACGTGGGTCAGA | 2 | 9.36733e-06 |
| AACAAGGTACATCCTCGCGTAACATCTTGGCCCACTCGTG | 1 | 4.68367e-06 |
| AACAAGGTGCACGCGTGGACGTAACATGGATCAGTGGGCG | 1 | 4.68367e-06 |
| AACAAGGTGGATGTACGGTTACACGTGTTGTCCGTGGGTA | 1 | 4.68367e-06 |
| AACAAGTAGTGCGTGGCTTGGGCCACGTTCTGTGCAGGGG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.