These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACACCATGTCACGCGGAGCGGCCGAAGTGATTGGGTGGC | 1 | 4.68367e-06 |
| AACACCCCACCAGTGGGACTTGTACCCGGAGGCGTGACTA | 1 | 4.68367e-06 |
| AACACCCTGCGTGGATACCATTTGGGGGGGTAGGCGGCTG | 1 | 4.68367e-06 |
| AACACCGCATGGAACGAGCGCGTGGGGAGGGGCTGGTTGC | 1 | 4.68367e-06 |
| AACACCTCTTCGACTGTGCTGTGATGTCACGCAAATCACG | 1 | 4.68367e-06 |
| AACACGAAAACCGCGGCGCGGTGCCTGGATCCTGGATATG | 1 | 4.68367e-06 |
| AACACGAAATGCGGGGGATCGATGCGTGGGCAGTGTCCCT | 1 | 4.68367e-06 |
| AACACGACGTCATGTTTTGCCAGCTGTGTGGCACGTGCTA | 1 | 4.68367e-06 |
| AACACGAGGGGTGGTGTCCACGCGCGTACGGCGGTCGATC | 1 | 4.68367e-06 |
| AACACGAGTGGGGGGACGAGGGGTTGTCCACGGACTTGCG | 1 | 4.68367e-06 |
| AACACGAGTGGGGTGTCGTTAACGCACGTCCTCGGGTTTC | 1 | 4.68367e-06 |
| AACACGATAAATGTACGTGGGAGGGATGGATTGAGTGTAT | 1 | 4.68367e-06 |
| AACACGATCGCTTCAGCGCGTGGGCAGCGGAGTAGATAGA | 1 | 4.68367e-06 |
| AACACGCAAAATGGCTGTGGGGGCAACGCCCGGCGAGTGG | 1 | 4.68367e-06 |
| AACACGCAGCTCGCGTTCTAGCGGGCCACGAAACGGATAA | 1 | 4.68367e-06 |
| AACACGCAGTCTCGGCTCCGCGCCTGGCAGTTATTGTAGC | 1 | 4.68367e-06 |
| AACACGCATCCGTGGGAGGAAGGCGCGGGGAGGACTCACG | 1 | 4.68367e-06 |
| AACACGCCATTGGTGATCGGGCCATCCAGGTGGTCGTGTT | 1 | 4.68367e-06 |
| AACACGCCTGCGGGACAGGTGTGGACGTGGATGGACCGAC | 1 | 4.68367e-06 |
| AACACGCGCCGTGGGAGTGGACTCTCCCTGATAGTATTTC | 1 | 4.68367e-06 |
| AACACGCGGCCGTGTGCACAGGTTGCTCAGTGCGTGTGGA | 1 | 4.68367e-06 |
| AACACGCGTAGTGGGTGGAACGTCACTAAATATTATGGTG | 1 | 4.68367e-06 |
| AACACGCGTGGATCTTTTTGGGCGCGATGACAGTGGGGGT | 1 | 4.68367e-06 |
| AACACGCGTGGCATACACCGCAAGTGATTTCAGGGCTCGT | 1 | 4.68367e-06 |
| AACACGCGTGGGAATGGCACGCAACGTGTCGAGGCGATGC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.