These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACAAGTGGGCCCGGCTTAGCGTGGACCGATAGGGGAATT | 1 | 4.68367e-06 |
| AACAAGTGTTCCGGCCACCCGGTGCTCTAATAACCAGCCC | 1 | 4.68367e-06 |
| AACAATAAAAATCCCACCATGTGATCCCACTCCACGTCGT | 1 | 4.68367e-06 |
| AACAATAGCTTTCACGGGTTACAGACCCGCAATGCTGGAG | 1 | 4.68367e-06 |
| AACAATATTGATCGACCAGTGGAAGGGCAGCGTCCACGAA | 1 | 4.68367e-06 |
| AACAATCAAATAACACTAGATTTGGGTAACGTTCTGCAGC | 1 | 4.68367e-06 |
| AACAATCCACGCGGTTTGCGCTCGTGCCTCCGGGAACGGG | 1 | 4.68367e-06 |
| AACAATCGTAGGGCATAGCGGGGTGGCCGTGCTCAATGTG | 1 | 4.68367e-06 |
| AACAATCGTGTAGGCTCATCAGTCGGCTAGGTGCCTGCCT | 1 | 4.68367e-06 |
| AACAATGCGGGGATTCCATAGGAGTGTCCACGGGTCTGGG | 1 | 4.68367e-06 |
| AACAATGGGTGTGAGAATCGGCGTGGGGACATTATGTACG | 1 | 4.68367e-06 |
| AACAATGGTAACGACGGCGAGGCAGGTGGGTGGGGGGTTC | 1 | 4.68367e-06 |
| AACAATTTTGCTAAGTATGGTGTGTACATCCGCGTGAGCG | 1 | 4.68367e-06 |
| AACACAAGGTAGTAATGATGGTACCAAACAGTGGGGATTC | 1 | 4.68367e-06 |
| AACACACGTGACACGCGTGCATCCCTGTCAGACGGGCAGA | 1 | 4.68367e-06 |
| AACACACTCTACCTCGATGCATCCCGTGACGTGCCAACTT | 1 | 4.68367e-06 |
| AACACAGAGACGATGCGTGGAATACAAGTCAGTCGTCGGG | 1 | 4.68367e-06 |
| AACACAGGAAATGTGAAGCCGCGTCCCGCTGCGGCAAGCT | 1 | 4.68367e-06 |
| AACACAGGGGGAAATTGCGTGGAGACGGTCGAGTGACAGT | 1 | 4.68367e-06 |
| AACACAGTACTGCCAGGCAGCATGGAATGAGCGATGGGAC | 1 | 4.68367e-06 |
| AACACAGTAGGTGGAGGATCGTGGAATCCGCGTGTGTTAA | 1 | 4.68367e-06 |
| AACACAGTGGAAGGCGTGGTGATCCAATAAATCTGTGGCG | 1 | 4.68367e-06 |
| AACACATGAGGACTGACGGCGGCGTCGCCGAGTTCTAGCT | 1 | 4.68367e-06 |
| AACACATGTGAGAGATCCCAAGGTGGGACGGGCTGCTGGT | 1 | 4.68367e-06 |
| AACACCATCGGTGCCTTGAAGCAAGACCGGCGAGAGAGGC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.