These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAGGCGGGGATCATCGTTCACGAGTGGGCGTAGTGCCT | 1 | 4.68367e-06 |
| AAAAGGCGGGGATTTAAGTGGTTCCGTGACGCCAGTGGGA | 1 | 4.68367e-06 |
| AAAAGGCTCCGAGTGGGCAGGCAGTAGTGTTGCGTGGGGC | 1 | 4.68367e-06 |
| AAAAGGCTCCTATCCTCGTGGGAACGCGGCGTATCCGTGG | 1 | 4.68367e-06 |
| AAAAGGCTGGAGTGGGCGGCCCCGAGTAGCAGGGCGTGGA | 1 | 4.68367e-06 |
| AAAAGGGACGACGTGCGGCCACGAGTGGATGTGGGTCCGT | 1 | 4.68367e-06 |
| AAAAGGGCGAAAACACACCCGCGACAATGTACAGGTCGTG | 1 | 4.68367e-06 |
| AAAAGGGCGAGGATGCGCTAAAGAGGCCACGCGGGGGAGT | 1 | 4.68367e-06 |
| AAAAGGGGCATTTAGGTCCAGGGAAGTGCGCTTCCTGGAG | 1 | 4.68367e-06 |
| AAAAGGGGGGAAGCATGCAAGAGACGTCAAGCAGAGCACG | 1 | 4.68367e-06 |
| AAAAGGGGGGTCCTTGGAGATGACGTGGGGGCTGCGTGTA | 1 | 4.68367e-06 |
| AAAAGGGGGTCGTCTAGCCTCGGCGGCCGGCGCACTTGTG | 1 | 4.68367e-06 |
| AAAAGGGGTGCCGTCAGGGTACGTGGAGTGGACGAGTGCG | 1 | 4.68367e-06 |
| AAAAGGGTCCCACGAGGGGGGGCGGTGGAGTGGAGCAGCA | 1 | 4.68367e-06 |
| AAAAGGGTCCTTCAGTTCCGCGTGGGTAGACTACGTGATC | 1 | 4.68367e-06 |
| AAAAGGGTTCGGTACGTGTAGGACATCAGTTGTTCGTTCT | 1 | 4.68367e-06 |
| AAAAGGTAGCATTCCGCGTGGGACGCCGAGGGCGATCGCA | 1 | 4.68367e-06 |
| AAAAGGTCCGGAGTGGCTGGTGAGCATAGACATTGAGTCA | 1 | 4.68367e-06 |
| AAAAGGTGAAGCCGTTGTCGAGGTTCCCTCGTGTTGGTTT | 1 | 4.68367e-06 |
| AAAAGGTGAATACTCCACGCGCGTCGGCAGAGAGGAACAT | 1 | 4.68367e-06 |
| AAAAGGTGAGAGATGTAAGTTGGGATGTATGTCTTAGGGG | 1 | 4.68367e-06 |
| AAAAGGTGAGTGGGGGTGGCTGTGGACGTGGACTAAGTGA | 1 | 4.68367e-06 |
| AAAAGGTGATAGGGTGATGTGGACGGTACACGCGTGGGCC | 1 | 4.68367e-06 |
| AAAAGGTGCAAGCAGTGGTCGAGACCACCGGACCACGGGT | 1 | 4.68367e-06 |
| AAAAGGTGCAAGGGGATTTGAACTGCGCCGTGCTCAGTCC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.