These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAGGTGCGTGGGCCACGCGTGTGACGCTGATATTCGTC | 1 | 4.68367e-06 |
| AAAAGGTGGACAATTGCGTGGGTTATGTTCTGGAGGCGAG | 1 | 4.68367e-06 |
| AAAAGGTGGGGTTAATCGTGGCGCAATCGAACACGTGTGT | 1 | 4.68367e-06 |
| AAAAGGTGTGCCACCGGTGGGTCGCAGCGTTTGGGTGTAC | 1 | 4.68367e-06 |
| AAAAGGTTGAGGTCACATGGTGATTATCACGAGTGGGCGC | 1 | 4.68367e-06 |
| AAAAGGTTGCGCGTGGGGGGCAGCGTGTAGTCGGATGTTG | 1 | 4.68367e-06 |
| AAAAGGTTGGTGATAATGAATGGGGATCACGGGGCGTGTC | 1 | 4.68367e-06 |
| AAAAGTACGGTGACCGGCTGTTTCTACAGTGGTCCGTCAT | 1 | 4.68367e-06 |
| AAAAGTAGACCGTGTGAACTGGCGTGGACGTGGGTGTCGG | 1 | 4.68367e-06 |
| AAAAGTAGTTCCACGATCACAGTAAGCTCGGATGGTCCAC | 1 | 4.68367e-06 |
| AAAAGTATTAGTCCGCCGGCGTGCGCTAGGTAAACGGCTA | 1 | 4.68367e-06 |
| AAAAGTCCACGGCACTCGCGCGAGGTATTCGTGTTGCGCG | 1 | 4.68367e-06 |
| AAAAGTCCTGTGCGTGGATGGCTATGGCGTCTTTTCCACT | 1 | 4.68367e-06 |
| AAAAGTCGAGTGGGCCCTAACTCCTCCCACGTCGGTGGTG | 1 | 4.68367e-06 |
| AAAAGTCGTTACGTTGCTCAAGGCTCGCCTCGCTGCAGGG | 1 | 4.68367e-06 |
| AAAAGTGCGGGGGGCGGCGGATAGGGTCGTGGGTCTAAAC | 1 | 4.68367e-06 |
| AAAAGTGCGGTATCTAGGAGGCCTCATGGTATTGTATCGA | 1 | 4.68367e-06 |
| AAAAGTGCGTGGGGTATACACGATCGTTATCGTCGTGATG | 1 | 4.68367e-06 |
| AAAAGTGGGAAGGTGTCGGTTGCGTGGGTTAGAGTAGTCG | 1 | 4.68367e-06 |
| AAAAGTGGGAGAACTGAGTTGATGAGTGGGAGGTTAGACG | 1 | 4.68367e-06 |
| AAAAGTGGGAGCGGCAGACGTGGTGTCGGTAGAATGGGCC | 1 | 4.68367e-06 |
| AAAAGTGGGCGTGGCTGCAGTGACGTGGACGGGAAATAGT | 1 | 4.68367e-06 |
| AAAAGTGGGGCAGGGTACCTACGAAATGACGTGACGTGTC | 1 | 4.68367e-06 |
| AAAAGTGGGGTGACAGCACACGTAGAATTCCGTCGTGGAA | 1 | 4.68367e-06 |
| AAAAGTGGTGAGTTTGCTTAGCTATCCCCGGTTTTATATG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.