These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACAGTGGTGGTAGTAGGAAACGTGGCGAGTTGCGTGGGA | 1 | 4.68367e-06 |
| AACAGTGTACAGAGGTTGTGGAGGTGCCGTTTTAGATGGC | 1 | 4.68367e-06 |
| AACAGTGTCGAATTTTTATTGTAACGACCTGAATTGCTGC | 1 | 4.68367e-06 |
| AACAGTGTCTTAGGATGGTCATTTGGCCGAGGACGGTAGG | 1 | 4.68367e-06 |
| AACAGTTACGTGGATTGGAGGGCGAGCAGAGTGGGTGGAC | 1 | 4.68367e-06 |
| AACAGTTAGGGGTCGTGTGTTATCGAGTGGGTTGCGAGTA | 1 | 4.68367e-06 |
| AACAGTTAGTTATCCACGGACGTACACGAGTGCTTTATGC | 1 | 4.68367e-06 |
| AACAGTTATACGACTTATGAGGTAGTATCGTGAGAGTGGG | 1 | 4.68367e-06 |
| AACAGTTCGGGAGCCGCGGCGGGGCACTTACAAGAATCAA | 1 | 4.68367e-06 |
| AACAGTTGTATGCGTGGAAAATAAGGCCGCGCCACCACGT | 1 | 4.68367e-06 |
| AACAGTTTCACGGCTGCGTGGATTAGAAGAGGCGATATCG | 1 | 4.68367e-06 |
| AACATAAGGGTGCGTGATGCGCCACGTGAAGCGTGGAGCT | 1 | 4.68367e-06 |
| AACATAATCTGTGGTGGGGATGGGCTGCGTGACAGGTGCG | 1 | 4.68367e-06 |
| AACATACACCGTGCGAGAACACGAAAGTGGTGAATGTGCG | 1 | 4.68367e-06 |
| AACATACTCTTTTAGATCTCGCGTGGGTTATCGGTGTGGG | 1 | 4.68367e-06 |
| AACATAGAATTCCGCGTGCTGTGGTCGTGGGTCAGTGTGA | 1 | 4.68367e-06 |
| AACATAGAGTCATGCAACGTAATGGTTGAGTGTGCGATCT | 1 | 4.68367e-06 |
| AACATAGTCCCACGAAACCCGTCTCGTGCGTGGGCGTCGA | 1 | 4.68367e-06 |
| AACATAGTGGGGGATATGTGGCCGGCTGCGTACGTGGAGA | 1 | 4.68367e-06 |
| AACATATCGTTAATCATCGAGAGTTTTCCACGGCAGAATT | 1 | 4.68367e-06 |
| AACATATTATGGCGTGCAGTTTGTGCTAATGAGTGGGAGT | 1 | 4.68367e-06 |
| AACATCAACGTGCGTTTGTAGTCTCGTGTGGTTTGCGTGA | 1 | 4.68367e-06 |
| AACATCACAGAGAGGCCTTCGCTACTGACAAGTGATTGGG | 1 | 4.68367e-06 |
| AACATCATAGTCCATGGAGGTTCCTGCGTGGGAAATGTCA | 1 | 4.68367e-06 |
| AACATCCCACGTGGCTTCGCGTGGATAGGGAGGGATTGCA | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.