These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACATCCCGCCGGCGGTCCTGCGCGACGTTGCGGCGTGGG | 1 | 4.68367e-06 |
| AACATCCTACGTGATGCAAGCGTGGAATCTCGTAAAAGCT | 1 | 4.68367e-06 |
| AACATCCTGCGTGGGCGTGGACGGCGTTGGGTGGGCGTAC | 1 | 4.68367e-06 |
| AACATCCTGTGGGGTGGATGTTTTTCCTTGCGTGGAGTAC | 1 | 4.68367e-06 |
| AACATCGAGTGCCAGGTTCAGGGGTCATGATTTGCTCCGT | 1 | 4.68367e-06 |
| AACATCGCCCTATGGATGTAATTTCTCACTGGCTGCGTTT | 1 | 4.68367e-06 |
| AACATCGTATCGGTTTGAGCGTGGCGTGACGGGGGAACTC | 1 | 4.68367e-06 |
| AACATCGTCTAGTAAGCGCCGTGGATTTGGGTGGGTATAT | 1 | 4.68367e-06 |
| AACATCGTGACGCGTGGGTCGTGGGTCTTTATGGGGATTG | 1 | 4.68367e-06 |
| AACATCGTGCATTATCGGAGCGCGTGGTACGCGTCACGCT | 1 | 4.68367e-06 |
| AACATCGTTACGTGGGCTCTTGTGGGCTTGACGTCGAGAC | 1 | 4.68367e-06 |
| AACATCGTTCGCGCGTGTGGCGGGTCTAGTCACTGAGTAC | 1 | 4.68367e-06 |
| AACATCTATGTCCTCTGGGGAGTAAAAGACGGTTACGTTC | 1 | 4.68367e-06 |
| AACATCTGAGTGGGTCTCTGCGGGGATCTTTGGATCCACC | 1 | 4.68367e-06 |
| AACATGACCTGGGTGCCTTATTGCCGGGGCATAGGAGACC | 1 | 4.68367e-06 |
| AACATGACGAAAACGGTCACGGGTGGGCGTAGGGGATGGA | 1 | 4.68367e-06 |
| AACATGAGATCGGACGTCAAGATGCAGTGCAAAGTACGCA | 1 | 4.68367e-06 |
| AACATGAGTCGTGGGAGTGGCTGAAAGGTTCGTCGTCGTG | 1 | 4.68367e-06 |
| AACATGAGTGATCGGATTGGGCGACGTGTTCTCGTGGGGT | 1 | 4.68367e-06 |
| AACATGCCAAGAATAGTGGGGTTCTTCTCTCTCGGAAGCT | 1 | 4.68367e-06 |
| AACATGCCGAGAATAACGATGGTGGGCTAAGTTGCATGTT | 1 | 4.68367e-06 |
| AACATGCCGTGGGTCTACGTGCCCTCCTAAGACATGGCTG | 1 | 4.68367e-06 |
| AACATGCGCTCAGGTTCGCGTGGGCGAGAGTGGGTGGATC | 1 | 4.68367e-06 |
| AACATGCTTCGCAGGAGCTCACGGCAGTGATCTGTCGTGG | 1 | 4.68367e-06 |
| AACATGGCGATAACGGATGCATGACCAAGGTGATTGAGGC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.