These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AACATGGCTGGTGGACCTGGGCGTGTGCTTTACGTCGGCA | 1 | 4.68367e-06 |
| AACATGGGCAGCGAATCCGATTGACATGTGTAGTTCGTGG | 1 | 4.68367e-06 |
| AACATGGTTGTCGTGGGCGTGGGGTAGGCTTGAGGGGCGT | 1 | 4.68367e-06 |
| AACATGTAAGCCTTCCACGAGCGATGGACGTATTGGTGGA | 1 | 4.68367e-06 |
| AACATGTACTGCGTGGGTAGGATGGGGGACGCGTCACAGT | 1 | 4.68367e-06 |
| AACATGTAGAGTCACGGCGGTCGTGGGGAATGTTCCGTGA | 1 | 4.68367e-06 |
| AACATGTCGGTAGTGTCACGCATTCGGGTGGAACCTCTGG | 1 | 4.68367e-06 |
| AACATGTGATCCACTTAACTAAAGCGTGACGTGGGTGGTT | 1 | 4.68367e-06 |
| AACATTAATGGACGTTACATCAAGTCACGTGTTAGAATTG | 1 | 4.68367e-06 |
| AACATTAGCACATACAGGCCGTAACGGCGGCCATGAGGAT | 1 | 4.68367e-06 |
| AACATTATCCACGAAGTAATCCGTGCGTGAGGTAGTGCGT | 1 | 4.68367e-06 |
| AACATTCGTAATGTATGGTGGCGCAAACGCTGCACTGAGT | 2 | 9.36733e-06 |
| AACATTCGTAGCGTTGGGTAGCGTATACGTTGCCTGACGT | 1 | 4.68367e-06 |
| AACATTCTAGGAGCTTAGACGTGGGAAGGTGGAATTGGTT | 1 | 4.68367e-06 |
| AACATTGAACCGGATATCGTGGGCCGTGAGTACTGTGGAT | 1 | 4.68367e-06 |
| AACATTGAGTGGGCAAGGGAATTACTAAACGTGGCTGGGG | 1 | 4.68367e-06 |
| AACATTGATAGGTTCTACGTCCTGCTGGTTGGGTACCTGC | 1 | 4.68367e-06 |
| AACATTGCGTGTATATTGAGTACAACGTCTAGTTGCGTGG | 1 | 4.68367e-06 |
| AACATTGTGAGTGGGGGAGAGCGTGGGCGTTAGTGTGGGT | 1 | 4.68367e-06 |
| AACATTGTGTGCGCGAGGTGTTTAGTGGGGTCCGCCGTGC | 1 | 4.68367e-06 |
| AACATTGTTACGACGCCGTGACTCGTGCGTGGGGGCGCAA | 1 | 4.68367e-06 |
| AACATTTCCACGGGGAGAGGACGGGGGGGATATATCGCCA | 1 | 4.68367e-06 |
| AACATTTCTACAGCTCCACACCACACTGAGTGTGGGCATG | 1 | 4.68367e-06 |
| AACATTTGAAGCTACAAGGCAGTGTGGTCAAGAGTGGAAC | 1 | 4.68367e-06 |
| AACATTTGTCGTTGAAGGGGGACTGTGGGGGAGGCTGCGG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.